LOCUS BC144000 3223 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens phosphatidic acid phosphatase type 2, mRNA (cDNA clone
MGC:177535 IMAGE:9052518), complete cds.
ACCESSION BC144000
VERSION BC144000.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: L Column: 16.
FEATURES Location/Qualifiers
source 1..3223
/db_xref="H-InvDB:HIT000502439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177535 IMAGE:9052518"
/tissue_type="Testis, PCR rescued clones"
/clone_lib="NIH_MGC_374"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGCTCTAA"
gene 1..3223
/gene="PAP2D"
/gene_synonym="PAP2"
/gene_synonym="PRG5"
/db_xref="GeneID:163404"
CDS 161..1126
/gene="PAP2D"
/gene_synonym="PAP2"
/gene_synonym="PRG5"
/codon_start=1
/product="phosphatidic acid phosphatase type 2"
/protein_id="AAI44001.1"
/db_xref="GeneID:163404"
/translation="MPLLPAALTSSMLYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFF
CHDSAYRKPYPGPEDSSAVPPVLLYSLAAGVPVLVIIVGETAVFCLQLATRDFENQEK
TILTGDCCYINPLVRRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYT
ALGCQQYTQFISGEEACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKG
TRLAKPVLCLGLMCLAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFKG
RQAENEHIHMDNLAQMPMISIPRVESPLEKVTSVQNHITAFAEVT"
BASE COUNT 971 a 682 c 601 g 969 t
ORIGIN
1 cctccgcctc ttcctccagc ggctccatcc cgcctcccgt gcctcgtcct cccgccgcct
61 ccgccgccgc gcccccggtg gctgcctcgg cggaccgggg agggggccca ccgcgtcgac
121 cgcccgctcg gctcggctcg gcccggcccg ggaggcgtgc atgcccctgc tgcccgcggc
181 gctcaccagc agcatgctct atttccagat ggtgatcatg gcagggacgg tgatgctggc
241 gtactacttc gagtatacgg acacgttcac cgtgaacgtg cagggcttct tctgccacga
301 cagcgcctac cgcaaaccct acccgggccc ggaggacagc agcgccgtgc cccccgtgct
361 cctctactcg ctggccgccg gggtccccgt gctcgtgata atagttggag aaactgctgt
421 cttttgccta caactagcca caagggattt tgaaaaccag gaaaaaacta ttttaactgg
481 agactgttgc tatataaacc cgctggtgcg ccgaactgtc cgatttcttg gaatttatac
541 atttggactg tttgctacag atatctttgt aaatgctgga caagtagtca caggaaatct
601 ggccccacat ttccttgccc tgtgtaagcc caattataca gcacttggat gtcagcagta
661 tacacaattc atcagtgggg aagaggcctg tactggcaac ccagatctca tcatgagagc
721 ccgaaaaacc tttccatcca aagaagcagc tctcagtgtc tatgcagcta tgtatctgac
781 catgtacatc accaacacaa tcaaagccaa gggaaccaga cttgctaagc cagttctatg
841 cttgggctta atgtgtttgg catttcttac tggactcaac agagtagcag aatatcgaaa
901 tcattggtca gatgttatag caggctttct ggttggaata tctatagcag tatttctggt
961 tgtgtgcgtg gtgaataatt tcaaagggag acaagcagaa aatgagcata tacacatgga
1021 taatctggca cagatgccaa tgatcagcat tcctcgagta gaaagtcctt tggaaaaggt
1081 aacatctgta cagaaccaca tcactgcctt cgcagaagtc acatgatatc gaagcagatg
1141 gtttttcact gcattggaca tcatcccttt ttaccatcca ttcataacac ccaaagtttg
1201 tttgattgca aatgaagttt ataaagttgt ttaataattt ttataatttt aaaatcaatg
1261 tcaacctatc tgtttccccc actagactgt gagctcctcg agggcaggat tgtctttttt
1321 ttttctgtgt ccccagcact tacaacaaag cctagcacaa agtaggtgtt caacaaaaat
1381 gtgatgacca aatgaacaaa attcttaaat aaaacattca ctttagtttc tcacagaatc
1441 attgcaatta tgttaaaaga aatctctaca taaatcgtat ttgtgtatga aaaccttcta
1501 ttttgggcta gttatttttt taatcttcat atatctattc agcagtatgc catatttaat
1561 tttgaagtgg actttgaaag tcatgggggt ttttattttg ttattcagca tgacattatt
1621 tccattctaa catttcagtg tgtgaaatta tttttagaaa gtatgttcta tagtaaaata
1681 atgtttccac attatattat gttatatttc acttaaaata ctattcatac tatacattct
1741 aagactggtg cttctgcttt tgaaggggaa aatgccaatt tttactgtaa taagtaatgt
1801 atcataatta aaaattattt atttggactt cttctcctga caattgtggc ttaattcatg
1861 acttgttttt gaatgcaggc agtatttagg gtagtttaaa tgagtaaatt cagcactggt
1921 accttattat tgagtaattt cccatgggta gcagtgtctc aagagtggtc aaaagctcca
1981 ctcttaggct tttttactac taaagattcc acataattta aatgggaaag aactataccc
2041 tgacacgtaa tttaaattat ataaatgcta gaaatatggt taatgtattt tactttgcat
2101 ttgtgtagta ctttatagtt tacaaagtat atttacacca attattttat gtaatcctca
2161 taataacctg gtataaacat gaagggtatg gctttatttt tatagataag aaaaatgaag
2221 ccaagacagg gtaaataaca tgccaaatca caaactagta agagacatag ttgaagctta
2281 aattcaagtt ttctggccct gaactcatat tcctttctaa tatagcacag ctgtcatctc
2341 attttggaca ctgaggcctt tcagagctca gtagaatcct gggcaactac ctatggttca
2401 aaaaataaag aaatgccaga atacaaatat gaaagctctg ctgtatttta aatgtttatg
2461 ttttaagaat gaacactttt caaatataaa actatataat aattataatc cagttttaag
2521 ataatatcaa gagtctagat gtgaggcttt ttgtgaaaga gaagcctaaa ttcagcatct
2581 ccccttccac cctcaccccc aggtcccagc ctcccactca gcagagtgcc caagggacat
2641 accttacatt tagcatgtag aattccagat tacaatcgcc ataatataag gaaggtgagc
2701 tcctcaacaa taactttgca ataattaaaa ctaccctaag taactttggc ttatatggca
2761 aagtaacttt ggcagtaatt gactgaaatg aacctttcta aactttacgg tactaaagaa
2821 agcaaacttt taatttcctc tgtaatttca acagagatca gcaaataaat ataaccaaag
2881 attgtccatt actccccaaa tagatgttat ttgcccattt ctatcactgt ggaagctaaa
2941 acacttctac tagggccaaa aagagaaaag aaaagaaaat ttctactaat ttcagacctc
3001 tagagcaatt cagtcctgtt ggaaatttag aacatgaaga aactttgaat gtcttgaccc
3061 tttttaaaga ttttttaggc aataacagta atagggaatt cacttattga gaatgaaagt
3121 gaaggggatg atcctaatgt cttagaaagc tagattacta gtaaggcttc cagacttcta
3181 tcagttctat tgattctaca tcagacttcc aagcagccaa gca
//