LOCUS BC143985 2178 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens arachidonate 5-lipoxygenase, mRNA (cDNA clone MGC:177520 IMAGE:9052503), complete cds. ACCESSION BC143985 VERSION BC143985.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2178) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2178) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 16 Row: L Column: 6. FEATURES Location/Qualifiers source 1..2178 /db_xref="H-InvDB:HIT000502424" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:177520 IMAGE:9052503" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: ACCCATTT" gene 1..2178 /gene="ALOX5" /gene_synonym="5-LO" /gene_synonym="5-LOX" /gene_synonym="5LPG" /gene_synonym="LOG5" /db_xref="GeneID:240" /db_xref="HGNC:HGNC:435" /db_xref="MIM:152390" CDS 68..1921 /gene="ALOX5" /gene_synonym="5-LO" /gene_synonym="5-LOX" /gene_synonym="5LPG" /gene_synonym="LOG5" /codon_start=1 /product="ALOX5 protein" /protein_id="AAI43986.1" /db_xref="GeneID:240" /db_xref="HGNC:HGNC:435" /db_xref="MIM:152390" /translation="MPSYTVTVATGSQWFAGTDDYIYLSLVGSAGCSEKHLLDKPFYN DFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR WITGDVEVVLRDGRAKLARDDQIHILKQHRRKELETRQKQYRWMEWNPGFPLSIDAKC HKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWNDFADFEKIFVKISNT ISERVMNHWQEDLMFGYQFLNGCNPVLIRRCTELPEKLPVTTEMVECSLERQLSLEQE VQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD ENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHP IFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLC FPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQD FVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQLFLGMYPE EHFIEKPVKEAMARFRKNLEAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI" BASE COUNT 501 a 641 c 592 g 444 t ORIGIN 1 gctagatgcg gacacctgga ccgccgcgcc gaggctcccg gcgctcgctg ctcccgcggc 61 ccgcgccatg ccctcctaca cggtcaccgt ggccactggc agccagtggt tcgccggcac 121 tgacgactac atctacctca gcctcgtggg ctcggcgggc tgcagcgaga agcacctgct 181 ggacaagccc ttctacaacg acttcgagcg tggcgcggtg gattcatacg acgtgactgt 241 ggacgaggaa ctgggcgaga tccagctggt cagaatcgag aagcgcaagt actggctgaa 301 tgacgactgg tacctgaagt acatcacgct gaagacgccc cacggggact acatcgagtt 361 cccctgctac cgctggatca ccggcgatgt cgaggttgtc ctgagggatg gacgcgcaaa 421 gttggcccga gatgaccaaa ttcacattct caagcaacac cgacgtaaag aactggaaac 481 acggcaaaaa caatatcgat ggatggagtg gaaccctggc ttccccttga gcatcgatgc 541 caaatgccac aaggatttac cccgtgatat ccagtttgat agtgaaaaag gagtggactt 601 tgttctgaat tactccaaag cgatggagaa cctgttcatc aaccgcttca tgcacatgtt 661 ccagtcttct tggaatgact tcgccgactt tgagaaaatc tttgtcaaga tcagcaacac 721 tatttctgag cgggtcatga atcactggca ggaagacctg atgtttggct accagttcct 781 gaatggctgc aaccctgtgt tgatccggcg ctgcacagag ctgcccgaga agctcccggt 841 gaccacggag atggtagagt gcagcctgga gcggcagctc agcttggagc aggaggtcca 901 gcaagggaac attttcatcg tggactttga gctgctggat ggcatcgatg ccaacaaaac 961 agacccctgc acactccagt tcctggccgc tcccatctgc ttgctgtata agaacctggc 1021 caacaagatt gtccccattg ccatccagct caaccaaatc ccgggagatg agaaccctat 1081 tttcctccct tcggatgcaa aatacgactg gcttttggcc aaaatctggg tgcgttccag 1141 tgacttccac gtccaccaga ccatcaccca ccttctgcga acacatctgg tgtctgaggt 1201 ttttggcatt gcaatgtacc gccagctgcc tgctgtgcac cccattttca agctgctggt 1261 ggcacacgtg agattcacca ttgcaatcaa caccaaggcc cgtgagcagc tcatctgcga 1321 gtgtggcctc tttgacaagg ccaacgccac agggggcggt gggcacgtgc agatggtgca 1381 gagggccatg aaggacctga cctatgcctc cctgtgcttt cccgaggcca tcaaggcccg 1441 gggcatggag agcaaagaag acatccccta ctacttctac cgggacgacg ggctcctggt 1501 gtgggaagcc atcaggacgt tcacggccga ggtggtagac atctactacg agggcgacca 1561 ggtggtggag gaggacccgg agctgcagga cttcgtgaac gatgtctacg tgtacggcat 1621 gcggggccgc aagtcctcag gcttccccaa gtcggtcaag agccgggagc agctgtcgga 1681 gtacctgacc gtggtgatct tcaccgcctc cgcccagcac gccgcggtca acttcggcca 1741 gctgttcctg ggcatgtacc cagaagagca ttttatcgag aagcctgtga aggaagccat 1801 ggcccgattc cgcaagaacc tcgaggccat tgtcagcgtg attgctgagc gcaacaagaa 1861 gaagcagctg ccatattact acttgtcccc agaccggatt ccgaacagtg tggccatctg 1921 agcacactgc cagtctcact gtgggaaggc cagctgcccc agccagatgg actccagcct 1981 gcctggcagg ctgtctggcc aggcctcttg gcagtcacat ctcttcctcc gaggccagta 2041 cctttccatt tattctttga tcttcaggga actgcataga ttgatcaaag tgtaaacacc 2101 atagggaccc attctacaca gagcaggact gcacagcgtc ctgtccacac ccagctcagc 2161 atttccacac caagcagc //