LOCUS BC143951 3499 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens ecotropic viral integration site 1, mRNA (cDNA clone
MGC:177486 IMAGE:9052469), complete cds.
ACCESSION BC143951
VERSION BC143951.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3499)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3499)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: B Column: 18.
FEATURES Location/Qualifiers
source 1..3499
/db_xref="H-InvDB:HIT000502390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177486 IMAGE:9052469"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GCTCACGC"
gene 1..3499
/gene="EVI1"
/gene_synonym="AML1-EVI-1"
/gene_synonym="EVI-1"
/gene_synonym="MDS1-EVI1"
/gene_synonym="PRDM3"
/db_xref="GeneID:2122"
/db_xref="HGNC:HGNC:3498"
/db_xref="MIM:165215"
CDS 114..3464
/gene="EVI1"
/gene_synonym="AML1-EVI-1"
/gene_synonym="EVI-1"
/gene_synonym="MDS1-EVI1"
/gene_synonym="PRDM3"
/codon_start=1
/product="EVI1 protein"
/protein_id="AAI43952.1"
/db_xref="GeneID:2122"
/db_xref="HGNC:HGNC:3498"
/db_xref="MIM:165215"
/translation="MILDEFYNVKFCIDASQPDVGSWLKYIRFAGCYDQHNLVACQIN
DQIFYRVVADIAPGEELLLFMKSEDYPHETMAPDIHEERQYRCEDCDQLFESKAELAD
HQKFPCSTPHSAFSMVEEDFQQKLESENDLQEIHTIQECKECDQVFPDLQSLEKHMLS
HTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKHYECENCAKQVFTDPSNLQRHIRSQ
HVGARAHACPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHA
DCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHFAAGGFFGQGISLPGTPAMDKTSMV
NMSHANPGLADYFGANRHPAGLTFPTAPGFSFSFPGLFPSGLYHRPPLIPASSPVKGL
SSTEQTNKSQSPLMTHPQILPATQDILKALSKHPSVGDNKPVELQPERSSEERPFEKI
SDQSESSDLDDVSTPSGSDLETTSGSDLESDIESDKEKFKENGKMFKDKVSPLQNLAS
INNKKEYSNHSIFSPSLEEQTAVSGAVNDSIKAIASIAEKYFGSTGLVGLQDKKVGAL
PYPSMFPLPFFPAFSQSMYPFPDRDLRSLPLKMEPQSPGEVKKLQKGSSESPFDLTTK
RKDEKPLTPVPSKPPVTPATSQDQPLDLSMGSRSRASGTKLTEPRKNHVFGGKKGSNV
ESRPASDGSLQHARPTPFFMDPIYRVEKRKLTDPLEALKEKYLRPSPGFLFHPQFQLP
DQRTWMSAIENMAEKLESFSALKPEASELLQSVPSMFNFRAPPNALPENLLRKGKERY
TCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFK
CHLCDRCFGQQTNLDRHLKKHENGNMSGTATSSPHSELESTGAILDDKEDAYFTEIRN
FIGNSNHGSQSPRNVEERMNGSHFKDEKALVTSQNSDLLDDEEVEDEVLLDEEDEDND
ITGKTGKEPVTSNLHEGNPEDDYEETSALEMSCKTSPVRYKEEEYKSGLSALDHIRHF
TDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQPLHRKSKSQAYAMMLSLSDKESLHS
TSHSSSNVWHSMARAAAESSAIQSISHV"
BASE COUNT 1061 a 799 c 791 g 848 t
ORIGIN
1 caacatcgtg tgctgcttcg cgagaaagtc acattcggac cctttggcta gattgcttat
61 tcatagggct tcttgactaa agcccttgga gcactgggtt tttcttgaag tatatgatct
121 tagacgaatt ttacaatgtg aagttctgca tagatgccag tcaaccagat gttggaagct
181 ggctcaagta cattagattc gctggctgtt atgatcagca caaccttgtt gcatgccaga
241 taaatgatca gatattctat agagtagttg cagacattgc gccgggagag gagcttctgc
301 tgttcatgaa gagcgaagac tatccccatg aaactatggc gccggatatc cacgaagaac
361 ggcaatatcg ctgcgaagac tgtgaccagc tctttgaatc taaggctgaa ctagcagatc
421 accaaaagtt tccatgcagt actcctcact cagcattttc aatggttgaa gaggactttc
481 agcaaaaact cgaaagcgag aatgatctcc aagagataca cacgatccag gagtgtaagg
541 aatgtgacca agtttttcct gatttgcaaa gcctggagaa acacatgctg tcacatactg
601 aagagaggga atacaagtgt gatcagtgtc ccaaggcatt taactggaag tccaatttaa
661 ttcgccacca gatgtcacat gacagtggaa agcactatga atgtgaaaac tgtgccaagc
721 aggttttcac ggaccctagc aaccttcagc ggcacattcg ctctcagcat gtcggtgccc
781 gggcccatgc atgcccggag tgtggcaaaa cgtttgccac ttcgtcgggc ctcaaacaac
841 acaagcacat ccacagcagt gtgaagccct ttatctgtga ggtctgccat aaatcctata
901 ctcagttttc aaacctttgc cgtcataagc gcatgcatgc tgattgcaga acccaaatca
961 agtgcaaaga ctgtggacaa atgttcagca ctacgtcttc cttaaataaa cacaggaggt
1021 tttgtgaggg caagaaccat tttgcggcag gtggattttt tggccaaggc atttcacttc
1081 ctggaacccc agctatggat aaaacgtcca tggttaatat gagtcatgcc aacccgggcc
1141 ttgctgacta ttttggcgcc aataggcatc ctgctggtct tacctttcca acagctcctg
1201 gattttcttt tagcttccct ggtctgtttc cttccggctt gtaccacagg cctcctttga
1261 tacctgctag ttctcctgtt aaaggactat caagtactga acagacaaac aaaagtcaaa
1321 gtcccctcat gacacatcct cagatactgc cagctacaca ggatattttg aaggcactat
1381 ctaaacaccc atctgtaggg gacaataagc cagtggagct ccagcccgag aggtcctctg
1441 aagagaggcc ctttgagaaa atcagtgacc agtcagagag tagtgacctt gatgatgtca
1501 gtacaccaag tggcagtgac ctggaaacaa cctcgggctc tgatctggaa agtgacattg
1561 aaagtgataa agagaaattt aaagaaaatg gtaaaatgtt caaagacaaa gtaagccctc
1621 ttcagaatct ggcttcaata aataataaga aagaatacag caatcattcc attttctcac
1681 catctttaga ggagcagact gcggtgtcag gagctgtgaa tgattctata aaggctattg
1741 cttctattgc tgaaaaatac tttggttcaa caggactggt ggggctgcaa gacaaaaaag
1801 ttggagcttt accttaccct tccatgtttc ccctcccatt ttttccagca ttctctcaat
1861 caatgtaccc atttcctgat agagacttga gatcgttacc tttgaaaatg gaaccccaat
1921 caccaggtga agtaaagaaa ctgcagaagg gcagctctga gtcccccttt gatctcacca
1981 ctaagcgaaa ggatgagaag cccttgactc cagtcccctc caagcctcca gtgacacctg
2041 ccacaagcca agaccagccc ctggatctaa gtatgggcag taggagtaga gccagtggga
2101 caaagctgac tgagcctcga aaaaaccacg tgtttggggg aaaaaaagga agcaacgtcg
2161 aatcaagacc tgcttcagat ggttccttgc agcatgcaag acccactcct ttctttatgg
2221 accctattta cagagtagag aaaagaaaac taactgaccc acttgaagct ttaaaagaga
2281 aatacttgag gccttctcca ggattcttgt ttcacccaca attccaactg cctgatcaga
2341 gaacttggat gtcagctatt gaaaacatgg cagaaaagct agagagcttc agtgccctga
2401 aacctgaggc cagtgagctc ttacagtcag tgccctctat gttcaacttc agggcgcctc
2461 ccaatgccct gccagagaac cttctgcgga agggaaagga gcgctatacc tgcagatact
2521 gtggcaagat ttttccaagg tctgcaaacc taacacggca cttgagaacc cacacaggag
2581 agcagcctta cagatgcaaa tactgtgaca gatcatttag catatcttct aacttgcaaa
2641 ggcatgttcg caacatccac aataaagaga agccatttaa gtgtcactta tgtgataggt
2701 gttttggtca acaaaccaat ttagacagac acctaaagaa acatgagaat gggaacatgt
2761 ccggtacagc aacatcgtcg cctcattctg aactggaaag tacaggtgcg attctggatg
2821 acaaagaaga tgcttacttc acagaaattc gaaatttcat tgggaacagc aaccatggca
2881 gccaatctcc caggaatgtg gaggagagaa tgaatggcag tcattttaaa gatgaaaagg
2941 ctttggtgac cagtcaaaat tcagacttgc tggatgatga agaagttgaa gatgaggtgt
3001 tgttagatga ggaggatgaa gacaatgata ttactggaaa aacaggaaag gaaccagtga
3061 caagtaattt acatgaagga aaccctgagg atgactatga agaaaccagt gccctggaga
3121 tgagttgcaa gacatcccca gtgaggtata aagaggaaga atataaaagt ggactttctg
3181 ctctagatca tataaggcac ttcacagata gcctcaaaat gaggaaaatg gaagataatc
3241 aatattctga agctgagctg tcttctttta gtacttccca tgtgccagag gaacttaagc
3301 agccgttaca cagaaagtcc aaatcgcagg catatgctat gatgctgtca ctgtctgaca
3361 aggagtccct ccattctaca tcccacagtt cttccaacgt gtggcacagt atggccaggg
3421 ctgcggcgga atccagtgct atccagtcca taagccacgt atgacgttat caaggttgac
3481 cagagtggga ccaagtcca
//