LOCUS BC143891 3181 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens chromosome 1 open reading frame 175, mRNA (cDNA clone
MGC:177425 IMAGE:9052408), complete cds.
ACCESSION BC143891
VERSION BC143891.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: L Column: 13.
FEATURES Location/Qualifiers
source 1..3181
/db_xref="H-InvDB:HIT000502332"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177425 IMAGE:9052408"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCAGAGCA"
gene 1..3181
/gene="C1orf175"
/db_xref="GeneID:374977"
/db_xref="HGNC:HGNC:24802"
CDS 39..3173
/gene="C1orf175"
/codon_start=1
/product="C1orf175 protein"
/protein_id="AAI43892.1"
/db_xref="GeneID:374977"
/db_xref="HGNC:HGNC:24802"
/translation="MALSPGANLVFHEDPKMTPSPPSCGAPGLGSGTIPQPHPDMAQV
PMLNLLPSPGLALVPDLNDSLSPVSGEASGLVSENTPRPDDSRAIAPASLQITSSCSG
EALDLDSKDVSRPDSQGRLCPASNPILSPSSTEAPRLSSGNHPQSNSEDAFKCLSSKI
FKLGQRNSNPSRHELNPFIRHRSREGLVLGHCISRPSSKALLIPTSNSSLDLDSNPLL
NMGSRNTSKLNLNVAPDSHGTLIPDTNETITLASHNISESVSKGAFSTTWSTSSKETM
NVASSGHSRSDLSVTITQASYVTLIPGSSYGISLHSSTHGPNSTISPPSCMTLILGSN
ETLSLDSSLLFSDTSTLTLSSQQDDAKDNSIHTVPLEENLESWSEMASIKVGQFPLGF
PISNPAGKDAVTLQGIPEGAFDEVTSCLVKVPEKTEGGNNMALVENVTTLQKSQDLLE
AEGEKKTMIKKIMRQIQEEPLDSLSSSVRKQAMEILTQLSHTQPTLGMRERSELVNVC
VHSVFSLPSVQAMQEKDEAKAETIQALYHQTLEALQTLLKALFIEDPTPAGLKSILEA
LGPWMNSGKAHERARAVNTNVSVLNHMLLTLPFFMPLGFPALGLLLGRLILRIGDPDE
EIGCEALDGIIILYTILELQKRARDKEETNKKELYESNKHFLGPYNPVSPCQNILRVI
EEFGDFLGPQQIKDLLLAALEGLKGSSEAPGKDSREMMQLASEVMLSSVLEWYRHRAL
EVIPEIMQGIYMQLSHIQEPRARQVALLPVSLLASSFMTEVVVALLMCPLPLNSNGAE
MWRQLILCKPSCDVRDLLDLLLGSLKEKPVTKEGRASIVPLAAASGLCELLSVNSCMG
RVRRIYPQLLLALLIQVHYHIGLNLPGCVAPPKDTKKGAQPSPFVPVRWVVKVVKTLL
LRMGCSYETTFLEDQGGWELMEQVESHHRGVALLARAMVQYSCQELCRILYLLIPLLE
RGDEKHRITATAFFVEQPCEEGIVILMLRISWERQQQAVTGARSWRVTHSALPHGADG
HQTETSSNLLVLQV"
BASE COUNT 717 a 941 c 868 g 655 t
ORIGIN
1 gaagggggca ctggcattga gagacctcca gactggacat ggccctgagt ccaggggcta
61 acctggtctt ccatgaagac ccaaagatga caccaagtcc cccctcctgt ggggccccgg
121 gattagggtc tggtaccatc cctcagcccc acccagacat ggctcaggtg cctatgttga
181 atctgctccc aagtcctggc ttggctctcg ttccagatct taatgattct ttgagtccag
241 tctcagggga ggcctcaggc ctggtgtctg aaaacacccc cagacctgat gacagcagag
301 ctatcgctcc agcctccctc cagatcacca gttcttgttc tggtgaagcc ctggacctgg
361 attccaagga tgtctcaagg cctgactcac aggggcgcct ctgtccagcc tcaaacccca
421 ttctgagccc tagctctact gaggcccctc gtctgagctc tgggaaccac cctcagtcaa
481 attctgaaga tgccttcaag tgcctctcaa gtaagatttt caagttgggt cagagaaact
541 ccaacccttc taggcatgaa ttaaacccat ttataaggca ccgttccaga gaaggtctgg
601 ttctgggcca ctgcatctct aggccaagct caaaagcact ccttattcca acctcaaact
661 cttctctgga ccttgactcc aatccattgc tcaacatggg ctcaagaaac acctccaagc
721 tgaacctcaa tgtagctcca gattctcatg ggaccctaat cccagacaca aatgagacca
781 tcactttggc ttcacataat atctctgagt ctgtttcaaa aggagccttt agtaccacct
841 ggagcacaag ttcaaaggaa accatgaatg tggcttccag cggccactcc agatctgatt
901 tgagcgtgac catcactcaa gcctcgtatg tgaccctgat tcctggctcc agctatggta
961 tcagcctgca ctccagcacc catgggccca actccaccat ctctccaccc tcatgcatga
1021 ctctaatcct gggttccaat gagactctga gcctggactc cagcctcctg ttcagcgaca
1081 cctccacctt gacgctgagc agtcagcagg atgatgccaa ggacaacagc atccacactg
1141 tgcccctgga ggagaatctg gagagttgga gtgagatggc cagcattaag gtgggccagt
1201 tcccgctggg attccccatc tccaaccccg caggcaagga cgccgtgacc ttgcaaggca
1261 tccctgaggg agcctttgat gaagtgacct catgcctggt gaaggtgcca gagaagacag
1321 aaggtggcaa caacatggct ctggttgaga atgtcaccac ccttcagaag agccaggatc
1381 tgctggaggc agaaggagaa aagaagacca tgataaagaa gattatgagg cagatccagg
1441 aggagccact ggattctctc tcaagctccg tccgcaagca ggccatggag atcctgaccc
1501 agctgagcca cacccagccc accctgggca tgcgggagag gtcggagctg gtgaacgtgt
1561 gtgtgcacag cgtgttctcc ctgccctccg tgcaggcgat gcaggagaag gacgaggcca
1621 aggctgagac catccaggct ctttaccatc agaccctgga ggccctgcag acactgctca
1681 aagccctctt tatcgaggac cccactcctg ctgggctgaa gagcatcttg gaggccctgg
1741 ggccttggat gaactctggg aaggcccatg agcgagcacg ggctgtgaac accaatgtct
1801 ctgtgttgaa ccacatgctt ctaactctgc ctttctttat gcccttgggg ttcccggcgc
1861 tggggcttct gctggggaga ctcatccttc gcattgggga tcctgatgag gagattggct
1921 gtgaggctct ggacggcatc atcatcctct acactattct ggagctccaa aaacgagcca
1981 gagataagga agagaccaac aaaaaggagc tatatgagag caacaagcat ttcctggggc
2041 cctacaaccc tgtgagcccg tgccagaaca ttctgcgggt gatcgaggaa tttggagact
2101 tcctggggcc ccagcagata aaggacctgc tgctggccgc cctggaaggg ctgaaaggca
2161 gctcagaggc tccagggaag gactccaggg agatgatgca gctggcctcg gaggtcatgc
2221 tcagctcggt gctggagtgg taccgccaca gggcgctgga ggtgatccca gaaatcatgc
2281 aaggcatcta catgcagctg agccacatcc aggagcctcg ggcccgccag gtggccctgc
2341 tgcccgtctc cctcctggct agctccttca tgaccgaggt tgtggtggcc ctgctcatgt
2401 gccccctccc actgaacagc aatggagcag agatgtggag gcagctgata ctgtgtaagc
2461 ccagctgtga tgtccgagac ctcctggatc tgctcctggg cagcctgaag gagaagcccg
2521 tcaccaagga gggccgggct tccatcgtgc ccctggcggc agccagcggc ctgtgcgagc
2581 tcctgtccgt caacagctgc atgggccgtg tgaggcgcat ctaccctcag ctgctcctgg
2641 ccctgctcat tcaggtccat taccacatcg gcctcaacct gcctggctgc gtggctcctc
2701 ccaaggacac caagaagggt gcacagccct ctcccttcgt acctgtgcgc tgggtggtga
2761 aagtggtgaa aaccctgcta ctgaggatgg gctgctctta tgagaccacg tttctggagg
2821 accagggtgg ctgggagctc atggagcagg tggagagcca ccaccgcgga gtggccttgc
2881 tggcaagggc catggtgcag tactcctgcc aggagctgtg ccgcatcctc tacctgctca
2941 tcccgctcct ggagcgaggc gacgagaagc acaggatcac ggccaccgcc ttcttcgtgg
3001 agcaaccctg cgaagaagga attgtgatac tcatgcttag gatctcatgg gaaaggcaac
3061 aacaagcagt cacaggggct cggagctgga gagtgacaca ctcagctttg ccacatggtg
3121 ctgatggaca tcagacggag acttccagca atctgttggt tttgcaagtc tgaagctccg
3181 g
//