LOCUS BC143886 1441 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member 25,
mRNA (cDNA clone MGC:177419 IMAGE:9052402), complete cds.
ACCESSION BC143886
VERSION BC143886.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: J Column: 23.
FEATURES Location/Qualifiers
source 1..1441
/db_xref="H-InvDB:HIT000502327"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177419 IMAGE:9052402"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTATGCCT"
gene 1..1441
/gene="TNFRSF25"
/gene_synonym="APO-3"
/gene_synonym="DDR3"
/gene_synonym="DR3"
/gene_synonym="LARD"
/gene_synonym="TR3"
/gene_synonym="TRAMP"
/gene_synonym="WSL-1"
/gene_synonym="WSL-LR"
/db_xref="GeneID:8718"
/db_xref="HGNC:HGNC:11910"
/db_xref="MIM:603366"
CDS 69..1211
/gene="TNFRSF25"
/gene_synonym="APO-3"
/gene_synonym="DDR3"
/gene_synonym="DR3"
/gene_synonym="LARD"
/gene_synonym="TR3"
/gene_synonym="TRAMP"
/gene_synonym="WSL-1"
/gene_synonym="WSL-LR"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 25"
/protein_id="AAI43887.1"
/db_xref="GeneID:8718"
/db_xref="HGNC:HGNC:11910"
/db_xref="MIM:603366"
/translation="MEQRPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIG
LFCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQV
ALENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDT
DCGTCLPGFYEHGDGCVSCPTSTLGSCPERCAAVCGWRQNEAGMEALTPPPATHLSPL
DSAHTLLAPPDSSEKICTVQLVGNSWTPGYPETQEALCPQVTWSWDQLPSRALGPAAA
PTLSPESPAGSPAMMLQPGPQLYDVMDAVPARRWKEFVRTLGLREAEIEAVEVEIGRF
RDQQYEMLKRWRQQQPAGLGAVYAALERMGLDGCVEDLRSRLQRGP"
BASE COUNT 250 a 474 c 468 g 249 t
ORIGIN
1 ctgaaggcgg aaccacgacg ggcagagagc acggagccgg gaagcccctg ggcgcccgtc
61 ggagggctat ggagcagcgg ccgcggggct gcgcggcggt ggcggcggcg ctcctcctgg
121 tgctgctggg ggcccgggcc cagggcggca ctcgtagccc caggtgtgac tgtgccggtg
181 acttccacaa gaagattggt ctgttttgtt gcagaggctg cccagcgggg cactacctga
241 aggccccttg cacggagccc tgcggcaact ccacctgcct tgtgtgtccc caagacacct
301 tcttggcctg ggagaaccac cataattctg aatgtgcccg ctgccaggcc tgtgatgagc
361 aggcctccca ggtggcgctg gagaactgtt cagcagtggc cgacacccgc tgtggctgta
421 agccaggctg gtttgtggag tgccaggtca gccaatgtgt cagcagttca cccttctact
481 gccaaccatg cctagactgc ggggccctgc accgccacac acggctactc tgttcccgca
541 gagatactga ctgtgggacc tgcctgcctg gcttctatga acatggcgat ggctgcgtgt
601 cctgccccac gagcaccctg gggagctgtc cagagcgctg tgccgctgtc tgtggctgga
661 ggcagaatga agctgggatg gaggctctga ccccaccacc ggccacccat ctgtcaccct
721 tggacagcgc ccacaccctt ctagcacctc ctgacagcag tgagaagatc tgcaccgtcc
781 agttggtggg taacagctgg acccctggct accccgagac ccaggaggcg ctctgcccgc
841 aggtgacatg gtcctgggac cagttgccca gcagagctct tggccccgct gctgcgccca
901 cactctcgcc agagtcccca gccggctcgc cagccatgat gctgcagccg ggcccgcagc
961 tctacgacgt gatggacgcg gtcccagcgc ggcgctggaa ggagttcgtg cgcacgctgg
1021 ggctgcgcga ggcagagatc gaagccgtgg aggtggagat cggccgcttc cgagaccagc
1081 agtacgagat gctcaagcgc tggcgccagc agcagcccgc gggcctcgga gccgtttacg
1141 cggccctgga gcgcatgggg ctggacggct gcgtggaaga cttgcgcagc cgcctgcagc
1201 gcggcccgtg acacggcgcc cacttgccac ctaggcgctc tggtggccct tgcagaagcc
1261 ctaagtacgg ttacttatgc gtgtagacat tttatgtcac ttattaagcc gctggcacgg
1321 ccctgcgtag cagcaccagc cggccccacc cctgctcgcc cctatcgctc cagccaaggc
1381 gaagaagcac gaacgaatgt cgagaggggg tgaagacatt tctcaacttc tcggccggag
1441 t
//