LOCUS BC143784 839 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens Mix1 homeobox-like 1 (Xenopus laevis), mRNA (cDNA
clone MGC:177315 IMAGE:9052298), complete cds.
ACCESSION BC143784
VERSION BC143784.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 839)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 839)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: K Column: 20.
FEATURES Location/Qualifiers
source 1..839
/db_xref="H-InvDB:HIT000502226"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177315 IMAGE:9052298"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GGTGCGTT"
gene 1..839
/gene="MIXL1"
/gene_synonym="MILD1"
/gene_synonym="MIX"
/gene_synonym="MIXL"
/db_xref="GeneID:83881"
/db_xref="HGNC:HGNC:13363"
/db_xref="MIM:609852"
CDS 65..787
/gene="MIXL1"
/gene_synonym="MILD1"
/gene_synonym="MIX"
/gene_synonym="MIXL"
/codon_start=1
/product="MIXL1 protein"
/protein_id="AAI43785.1"
/db_xref="GeneID:83881"
/db_xref="HGNC:HGNC:13363"
/db_xref="MIM:609852"
/translation="MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPP
AGPGPATFAGFLGRDPGPAPPPPASLGSPAPPKGAAAPSASQRRKRTSFSAEQLQLLE
LVFRRTRYPDIHLRERLAALTLLPESRIQLLFSPLFQVWFQNRRAKSRRQSGKSFQPL
ARPEIILNHCAPGTETKCLKPQLPLEVDVNCLPEPNGVGGGISDSSSQGQNFETCSPL
SEDIGSKLDSWEEHIFSAFGNF"
BASE COUNT 131 a 303 c 247 g 158 t
ORIGIN
1 cctggcccgg gagggtataa gtgcggcccg cgcccctccg agcggcgcgc tgggttccgg
61 agcgatggcc acagccgagt cccgtgcgct ccagtttgcc gagggcgccg cgtttccagc
121 gtaccgggcc ccccacgccg gcggggcgct cctgccgccc ccgagccctg cggcagccct
181 gctccctgcg ccgcccgcgg gccccggccc agcgaccttt gcgggcttcc tcggccggga
241 ccccgggccg gccccgccgc cccccgccag cctgggctcg cctgcgcccc ccaaaggcgc
301 ggccgccccg tcggcgtcgc agcgccgcaa gcgcacgtct ttcagcgccg aacagctgca
361 gctgctggag ctcgtcttcc gccggacccg gtaccccgac atccacttgc gcgagcgcct
421 ggccgcgctc accctgctcc ccgagtccag gatccagctt ttattttctc ccctcttcca
481 ggtatggttc cagaacaggc gtgccaagtc tcggcgtcag agtgggaaat ccttccaacc
541 tttggctagg ccggagatta tcctcaacca ctgtgctcct ggaactgaaa cgaaatgtct
601 gaagccccag ctgcctcttg aggtagatgt gaactgcctg cccgaaccaa acggggttgg
661 agggggcatc tctgactcta gctcccaagg tcagaatttt gaaacctgtt cccctctctc
721 tgaagacatt ggttcaaagc tggactcatg ggaggaacac atcttttctg cctttggtaa
781 cttttgagga ttctgggaga attcgggata agctctgagg agccatgact gacagcctg
//