LOCUS BC143765 1540 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens Src homology 2 domain containing E, mRNA (cDNA clone
MGC:177296 IMAGE:9052279), complete cds.
ACCESSION BC143765
VERSION BC143765.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: I Column: 10.
FEATURES Location/Qualifiers
source 1..1540
/db_xref="H-InvDB:HIT000502208"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177296 IMAGE:9052279"
/tissue_type="Pooled,bladder, uterus, placenta, PCR
rescued clones"
/clone_lib="NIH_MGC_350"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ATACGGTA"
gene 1..1540
/gene="SHE"
/gene_synonym="RP11-350G8.8"
/db_xref="GeneID:126669"
/db_xref="HGNC:HGNC:27004"
/db_xref="MIM:610482"
CDS 24..1511
/gene="SHE"
/gene_synonym="RP11-350G8.8"
/codon_start=1
/product="Src homology 2 domain containing E"
/protein_id="AAI43766.1"
/db_xref="GeneID:126669"
/db_xref="HGNC:HGNC:27004"
/db_xref="MIM:610482"
/translation="MQWSPTPGASACLGWASSLACSTAPTLLGRAGRGPLMAAKWFKE
FPLNLKTVSERAKPGGGGGKLRKNSEAGGAGPGPGKGHKNSAAELGSGRAGVGPKDSR
LSRDSLQGLIQAAAGKGRKNSRATEEEPHRGATKSSGCSTYINRLIKVDTQEKNGKSN
YPSSSSSSSSSSSSASSSPSSLGPELDKGKIIKQQETVIILEDYADPYDTKRTKGQRD
AERVGENDGYMEPYDAQQMITEIRRRGSKDPLVKALQLLDSPCEPADGGLKSETLAKR
RSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARPPDSRLPENDERPAAEYEQPWEWKKE
QIVRALSVQFEGAERPSFREETVRQHHRQKSWTQKILKPALSDHSEGEKVDPGLPLEK
QPWYHGAISRAEAESRLQPCKEAGYLVRNSESGNSRYSIALKTSQGCVHIIVAQTKDN
KYTLNQTSAVFDSIPEVVHYYSNEKLPFKGAEHMTLLYPVHSKLH"
BASE COUNT 376 a 457 c 473 g 234 t
ORIGIN
1 ctccagcgcc ccagtcacgg ggaatgcagt ggtccccgac ccctggcgcc tctgcgtgtc
61 tgggctgggc ttcctcgctc gcctgctcca cggccccgac gctcctgggc cgagccggcc
121 ggggccccct catggcggcc aagtggttca aggagttccc cctgaacctg aagaccgtgt
181 cggagcgggc caagcccggg ggcggcggcg gcaaattgcg caagaactcg gaggcgggcg
241 gcgctgggcc gggtcctggc aagggccaca agaactcggc ggccgagctg gggagcggca
301 gggccggcgt cggccccaag gacagccggc tgtcccgcga cagcctgcag ggtctgattc
361 aggccgccgc gggcaagggc cgcaaaaact cccgcgccac ggaggaggag ccccaccggg
421 gtgcaaccaa gagctcgggc tgcagcacct acatcaacag gctcatcaag gtggacactc
481 aggagaagaa cgggaagagc aactacccca gcagcagtag ctccagctcc agctcctctt
541 cctccgcgtc ctcttcccct tcctccctgg ggcccgagct ggacaagggc aagattatta
601 agcagcaaga gacggtcatc attttagaag actatgctga cccttatgat accaaacgga
661 caaagggtca aagggatgca gagagagtcg gagagaacga cggttacatg gaaccatatg
721 atgcacagca aatgataaca gaaattagac gacggggttc caaagatccc ctggtgaagg
781 ctctccagct gcttgacagt ccctgtgaac ccgcagacgg tggcctgaaa tcagagacct
841 tggccaaaag acggagttcc aaggacctcc tggggaagcc gccacagcta tacgacactc
901 cctacgagcc tgcagaaggg gggcccaggg cagaggggaa ggcgcggccc ccagacagcc
961 ggctgcccga gaacgacgag aggcccgcgg cagagtacga gcagccatgg gagtggaaga
1021 aggagcagat cgtgcgggct ctgtcagtcc agtttgaagg agctgagcga ccttccttca
1081 gggaggagac agtgaggcag caccaccggc agaagagctg gacccagaag atcctgaagc
1141 cagccctctc ggaccacagt gagggagaga aagtggaccc gggcctgccc ctggagaagc
1201 agccctggta tcatggtgcc atcagccgtg ctgaggctga gagtcgacta cagccctgca
1261 aagaagctgg ttacctggtt cgaaatagtg agtcagggaa cagcaggtac tccattgccc
1321 taaagactag tcaaggatgt gtccacatca tagtggctca gaccaaagac aacaaataca
1381 cactgaatca gacaagcgct gtgtttgaca gcatccctga agtggtacac tattattcca
1441 atgaaaagtt gcctttcaaa ggggcagaac acatgacttt actctaccca gtgcacagca
1501 agcttcacta agattcagcc actgcaagcc ctgggcctct
//