LOCUS BC143737 5364 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052251, with apparent retained
intron.
ACCESSION BC143737
VERSION BC143737.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5364)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5364)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: E Column: 22
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..5364
/db_xref="H-InvDB:HIT000502180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052251"
/tissue_type="Brain, cerebral cortex and lung, PCR rescued
clones"
/clone_lib="NIH_MGC_325"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: ACACCATC"
BASE COUNT 1619 a 1084 c 1142 g 1519 t
ORIGIN
1 tgagctggta tcaattccaa aactggaaat cagcatgatg cagggatttg cccgcctttt
61 gatcaacttg ttaaagaaaa aggaacttct ttcaagagct gatttggagt taccctggag
121 accactttat gacatggtag aaagaatatt atattccaag acagagcacc taggattaaa
181 ttggtttcct aattctgtag aaaatattct caaaacactc gtgaaaagct gccgaccata
241 ttttccagca gatgccaccg ctgagatgct agaagaatgg cgacctttaa tgtgcccttt
301 tgatgtaacc atgcaaaagg ccatcactta ttttgaaata tttcttccta cctcccttcc
361 tccagaactt catcataaag gttttaaact ttggtttgat gaattaattg gcctttgggt
421 ttcagtgcaa aatctcccac aatgggaggg gcaactagta aatctctttg ctcgattggc
481 tacagataat atagggtaca tagattggga tccatatgta ccaaagatat ttacaagaat
541 tctgagaagc ttgaacctcc cagtgggaag cagtcaagtg ttagtcccaa gatttttaac
601 aaatgcttat gatataggac atgctgtaat atggatcacc gccatgatgg gtggaccaag
661 taagctagtg caaaaacact tagctggttt gtttaacagc atcacatctt tttaccatcc
721 ttcaaataat gggcgctggc tgaacaagtt aatgaaacta cttcagcggt tgccaaacag
781 tgttgttaga agattgcatc gtgaaagata caagaagccc tcttggttaa ctcctgtgcc
841 tgatagccac aagcttactg atcaagatgt tacagacttt gtacaatgca ttattcagcc
901 tgtcctcttg gctatgttta gcaaaaccgg tagtctagaa gcagcccagg ctttgcagaa
961 tcttgcactc atgagacctg aattggtaat accccctgta cttgaaagaa catatcctgc
1021 attagagaca ttaacagaac ctcaccagct cacagctact ttaagttgtg taattggagt
1081 agcccgcagt ttggtatcag gaggcagatg gtttcctgaa ggtcctacac atatgctacc
1141 tctgttgatg agagcattgc ctggggtgga tccaaatgac tttagtaaat gcatgatcac
1201 attccagttc atagcaacat tttctactct ggtgccttta gtagattgtt catctgtact
1261 acaagaaaga aatgacctca cagaagtgga acgagaactt tgttcagcca cagctgaatt
1321 tgaggatttc gtcttacagt ttatggacag atgttttgga cttatagaaa gtagcacatt
1381 ggagcaaaca agagaagaga cagaaactga gaaaatgaca cacttggaga gtttggtcga
1441 attaggtctg tcttctacgt ttagtacaat cctcacccaa tgttccaaag aaatatttat
1501 ggtggccctt cagaaggttt ttaatttttc tacttcacat atatttgaaa caagagtagc
1561 aggtcgcatg gtggcagaca tgtgccgcgc tgctgtaaag tgctgcccag aagaatcttt
1621 gaagctcttt gttccccact gctgcagtgt tataactcag cttacaatga atgatgatgt
1681 attaaatgat gaagagctag acaaggaatt actatggaat cttcaacttt tgtctgagat
1741 tactcgagtg gatggaagga agttgcttct ttatagggag cagcttgtaa agattctcca
1801 aagaacccta catttaacct gtaagcaggg ttacactctg tcttgtaacc ttttgcatca
1861 tcttctccgt tctaccacac ttatctaccc tacagaatac tgcagtgtgc caggtggctt
1921 tgacaagcct ccttctgaat actttcctat caaggactgg ggcaaacccg gggacttgtg
1981 gaatctggga atccagtggc atgttccttc ttcagaagaa gtgtcttttg ccttttatct
2041 tttggactcc tttcttcagc ctgagctcgt caaactccag cattgtgggg atggaaaact
2101 tgaaatgtct agagatgata ttctacagag tctgactata gtgcacaact gtttaattgg
2161 ctctggaaac ctcctacctc cgttgaaagg agagccagtt actaacttga aactacccag
2221 ctctgctggg ggagctgcac acagaaaagg aaacagttac tactccacga gtaccaagta
2281 tggtgtcctt ggaagagaca aagttgtata ctggacttga atatgatctg tctcgagaga
2341 accaccgaga agtaattgct acagttataa ggaaacttct taaccacata cttgataatt
2401 cagaagatga tactaagtca ttgtttctta ttataaagat tattggagac cttttacaat
2461 tccaaggatc tcacaagcat gaatttgact cccgatggaa aagcttcaac ttagtaaaga
2521 aatcaatgga aaatcggctc catgggaaaa aacaacatat cagagcactg ttgattgata
2581 gagtaatgtt acagcatgag ctacggacac taactgttga gggttgtgaa tacaaaaaga
2641 tacatcaaga tatgatcaga gatcttcttc gtttatctac aagttcatac agtcaggtga
2701 gaaataaggc tcagcaaaca ttttttgctg ccttgggagc atataacttc tgttgcagag
2761 atatcattcc cttggttttg gagttcttaa ggcctgatag acaaggtgtt acacagcaac
2821 aattcaaggg tgccttgtac tgtctccttg gaaatcacag tggtgtgtgc ttggcaaacc
2881 ttcatgattg ggactgtatt gtacagacgt ggccagcgat tgtttcttca gggcttagcc
2941 aagcaatgtc cctggaaaag ccatcaatag tgagattgtt tgatgatctt gcagaaaaga
3001 ttcataggca gtatgaaaca attggcttgg acttcacaat tccaaagtca tgtgttgaaa
3061 tagcggaatt acttcaacag tcaaaaaacc cctctatcaa ccagatattg cttagcccag
3121 aaaaaattaa ggaaggaatt aaacgccaac aggaaaagaa tgccgatgcc ctaaggaact
3181 atgaaaattt ggtagacacc ttgctagatg gtgtggagca aagaaacctg ccctggaaat
3241 ttgaacatat aggcattggg cttctgtctc tactgctgag agatgaccga gtgttgcctc
3301 ttcgtgccat acggtttttt gttgagaatc tcaaccatga tgcaattgta gttcgaaaga
3361 tggctatctc agctgttgct ggtatcctta aacagctaaa aagaacccac aaaaagctga
3421 ccattaaccc ctgtgaaatc agtggatgcc ctaaacccac ccaaattatt gctggtgata
3481 ggcctgataa tcattggttg cattatgaca gcaaaactat accaagaact aaaaaagaat
3541 gggagtcaag ttgctttgtg gaaaaaactc actggggata ctacacctgg ccaaagaata
3601 tggttgttta tgctggtgtg gaagagcagc ctaagcttgg cagaagcagg gaggatatga
3661 cagaggcaga acagattata tttgatcatt tttctgatcc taaatttgtt gagcagttaa
3721 ttacttttct atcattagaa gacagaaaag gaaaagataa gtttaatcca cgacgttttt
3781 gcctctttaa gggtatattc aggaattttg atgatgcctt cctgccagtt ctgaagcccc
3841 atttagaaca tttggttgca gattcacatg aaagcaccca gcgatgtgtt gcagaaatta
3901 tagctggttt aatcagaggt tctaagcact ggacatttga aaaggtggag aagctttggg
3961 agcttctgtg ccctctgctt agaacagcac tgtccaatat taccgtagaa acttataatg
4021 actggggagc ttgtatagca acatcctgtg aaagcagaga tccccggaaa cttcactggc
4081 tttttgaact gctgttggaa tcaccattga gtggtgaagg aggatccttt gtagatgcat
4141 gtcgacttta tgtactacaa ggtggccttg cccagcaaga atggagagtg cctgaactat
4201 tgcacagact actgaagtac ttggaaccca aactcaccca ggtttacaaa aatgtcagag
4261 aaagaatagg aagtgtgctg acctacatat tcatgataga tgtatctttg ccaaatacca
4321 caccaaccat atcgcctcat gtccctgagt ttactgctcg aattctggag aaattgaaac
4381 ctctcatgga tgtggatgaa gaaattcaga accatgttat ggaagaaaat ggaattggtg
4441 aagaagatga gcgaactcag ggcattaaac tcttgaaaac catattgaaa tggctgatgg
4501 caagtgcagg aagatccttt tctacagcag ttacagaaca acttcagctt ctacctttgt
4561 ttttcaagat tgccccagtg gaaaatgaca atagctacga tgaactgaaa agagatgcaa
4621 agttatgttt atcattaatg tctcaggggt tgctttaccc tcatcaagtg cctttggtac
4681 ttcaggtgct aaaacaaaca gcaagaagca gttcttggca tgcacgatac acagtactga
4741 cctacctcca gaccatggta ttttataacc tctttatttt cctaaacaat gaagatgcag
4801 ttaaagatat caggtggctg gttataagtc ttttggagga cgaacaactg gaggttcgag
4861 aaatggctgc tactacctta agcggtctgc tacagtgtaa ctttcttacc atggacagtc
4921 ctatgcagat tcattttgag caactttgca aaacaaaact acctaagaaa agaaagcgag
4981 accctggttc tgtaggagat accattcctt ctgcagagtt ggtcaaacgc catgctgggg
5041 tgctaggact tggtgcatgt gttctttcta gtccttacga tgttcccacc tggatgcccc
5101 agctcctcat gaatctcagt gcacatctaa atgatcctca gcctattgag atgactgtaa
5161 aaaaaacctt atccaatttc cgaaggactc accatgacaa ctggcaggaa cataaacagc
5221 aattcactga tgaccaactg cttgttctca ccgatcttct tgtgtcacca tgctattatg
5281 catagaaaga tgactagtcc tcacttcagg ctcttttcat caaaaattcc acaccctcag
5341 gtaccatctg tggtggctct ctgc
//