LOCUS BC143706 832 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens PAP associated domain containing 5, mRNA (cDNA clone
IMAGE:9052220), partial cds.
ACCESSION BC143706
VERSION BC143706.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 832)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 832)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: I Column: 23.
FEATURES Location/Qualifiers
source 1..832
/db_xref="H-InvDB:HIT000502150"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052220"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TTTGAGGT"
gene <1..>832
/gene="PAPD5"
/gene_synonym="TRF4-2"
/db_xref="GeneID:64282"
/db_xref="HGNC:HGNC:30758"
/db_xref="MIM:605540"
CDS <1..>832
/gene="PAPD5"
/gene_synonym="TRF4-2"
/codon_start=1
/product="PAPD5 protein"
/protein_id="AAI43707.1"
/db_xref="GeneID:64282"
/db_xref="HGNC:HGNC:30758"
/db_xref="MIM:605540"
/translation="QNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVFTGGI
GSYSLFLMAVSFLQLHPREDACIPNTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSY
VAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSP
IAKYYPNNETESILGRIIRVTDEVATYRDWISKQWGLKNRPEPSCNGNGVTLIVDTQQ
LDKCNNNLSEENEALGKCRSKTSESLSKHSSNSSSGPVSSSSATQSSSSDVDSDATPC
K"
BASE COUNT 270 a 152 c 173 g 237 t
ORIGIN
1 cagaatggcg tgagagcagc tgacctcatc aaagatttta ccaagaaata tcctgtattg
61 ccatacttgg ttttagtatt gaaacaattc ctattgcaga gggaccttaa tgaagtattt
121 acaggtggaa ttggttctta tagtctcttt ttaatggcag tcagtttcct tcagttacat
181 cccagggaag atgcttgcat ccccaataca aactatggtg ttctcttaat agaatttttt
241 gaattatatg gacgacactt caattattta aagactggca tccggataaa ggatggtggt
301 tcatatgtgg ccaaagatga agtacagaaa aatatgctag atggctacag gccatcaatg
361 ctttatatcg aagatccttt acaaccaggt aacgatgttg gaaggagttc atatggggcc
421 atgcaagtga agcaggcctt tgattatgcc tacgttgttt tgagtcatgc tgtatcacca
481 atagcaaagt actatcccaa caatgaaaca gaaagcatac taggtagaat aattagagta
541 acagatgaag ttgccacata tagagattgg atatcaaagc agtggggctt gaagaataga
601 cctgagcctt catgcaatgg aaatggtgtt accttgatag tagatactca gcagttagat
661 aaatgtaata ataatctatc tgaagaaaat gaagcccttg gaaaatgtag aagtaaaacc
721 tcggaatctc ttagtaaaca ctcttcaaac tcttcatcag gtccagtgtc gtcctcttct
781 gccacacagt ccagctctag tgatgtagat tccgatgcaa caccatgcaa aa
//