LOCUS BC143660 1098 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens chromosome X open reading frame 40A, mRNA (cDNA clone
MGC:177191 IMAGE:9052174), complete cds.
ACCESSION BC143660
VERSION BC143660.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1098)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: I Column: 17.
FEATURES Location/Qualifiers
source 1..1098
/db_xref="H-InvDB:HIT000502108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177191 IMAGE:9052174"
/tissue_type="Brain, cerebral cortex and lung, PCR rescued
clones"
/clone_lib="NIH_MGC_323"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GGTATGCT"
gene 1..1098
/gene="CXorf40A"
/gene_synonym="EOLA1"
/db_xref="GeneID:91966"
/db_xref="HGNC:HGNC:28089"
CDS 430..906
/gene="CXorf40A"
/gene_synonym="EOLA1"
/codon_start=1
/product="chromosome X open reading frame 40A"
/protein_id="AAI43661.1"
/db_xref="GeneID:91966"
/db_xref="HGNC:HGNC:28089"
/translation="MKFGCLSFRQPYAGFVLNGIKTVETRWRPLLSSQRNCTIAVHIA
HRDWEGDAWRELLVERLGMTPAQIQALLRKGEKFGRGVIAGLVDIGETLQCPEDLTPD
EVVELENQAVLTNLKQKYLTVISNPRWLLEPIPRKGGKDVFQVDIPEHLIPLGHEV"
BASE COUNT 248 a 287 c 331 g 232 t
ORIGIN
1 acgtctcctt gcttgggagc ccatcgtcct ggctccggtg gcctcgctgg gtctcgggga
61 agcagaggac tgttcattcc tgtggcgaaa agccggagtc ggccctagac acccacgact
121 cgcagggtcc atggttccgg aggccgtgag acctgccggg gctgacaggt gccagggccc
181 atgctgcggg agcctgtgtg ctcagccttc ttgcggacgg taaagaagct aagtggaaga
241 gtgtttcctc ctctggccgt aaagcagctg tccccgccct actccggacc gccccaaaga
301 ctccatggga tggacctgag tcagccgaat cccagcccct tcccttgggc ctgctgtggt
361 gctggacatc agtgacagac ggaagcagga gaccatcaag gctacgggag gcccggggcg
421 cttgcgaaga tgaagtttgg ctgcctctcc ttccggcagc cttatgctgg ctttgtctta
481 aatggaatca agactgtgga gacgcgctgg cgtcccctgc tgagcagcca gcggaactgt
541 accatcgccg tccacattgc tcacagggac tgggaaggcg atgcctggcg ggagctgctg
601 gtggagagac tcgggatgac tcctgctcag attcaggcct tgctcaggaa aggggaaaag
661 tttggtcgag gagtgatagc gggactcgtt gacattgggg aaactttgca atgccccgaa
721 gacttaactc ccgatgaggt tgtggaacta gaaaatcaag ctgtactgac caacctgaag
781 cagaagtacc tgactgtgat ttcaaacccc aggtggttac tggagcccat acctaggaaa
841 ggaggcaagg atgtattcca ggtagacatc ccagagcacc tgatcccttt ggggcatgaa
901 gtgtgacaag tgtgggctcc tgaaaggaat gttccagaga aaccagctaa atcatgacac
961 cttcaatttg ccatcatgac gcagacctgt atacattagg ttaaatctga atttccactg
1021 ctttggagag tcccacccac taagcactgt gcatgtaaac aggttccttt gctcagatga
1081 aggaagtagg gggtgggg
//