LOCUS BC143577 3354 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens zinc finger protein 827, mRNA (cDNA clone MGC:177105
IMAGE:9052088), complete cds.
ACCESSION BC143577
VERSION BC143577.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3354)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3354)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 674 Row: p Column: 6
isoform, single-stranded.
FEATURES Location/Qualifiers
source 1..3354
/db_xref="H-InvDB:HIT000502028"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177105 IMAGE:9052088"
/tissue_type="Liver, PCR rescued clones"
/clone_lib="NIH_MGC_290"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCGCCCCG"
gene 1..3354
/gene="ZNF827"
/db_xref="GeneID:152485"
/db_xref="HGNC:HGNC:27193"
CDS 65..3310
/gene="ZNF827"
/codon_start=1
/product="ZNF827 protein"
/protein_id="AAI43578.1"
/db_xref="GeneID:152485"
/db_xref="HGNC:HGNC:27193"
/translation="MPRRKQEQPKRLPSHVSRQEEAEGELSEGEHWYGNSSETPSEAS
YGEVQENYKLSLEDRIQEQSTSPDTSLGSTTPSSHTLELVALDSEVLRDSLQCQDHLS
PGVSSLCDDDPGSNKPLSSNLRRLLEAGSLKLDAAATANGRVESPVNVGSNLSFSPPS
HHAQQLSVLARKLAEKQEQNDQYTPSNRFIWNQGKWLPNSTTTCSLSPDSAILKLKAA
ANAVLQDKSLTRTEETMRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPAS
SFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPEDPLPPPPSEKKPEKVTPPPPPP
PPPPPPPPPQSLELLLLPVPKGRVSKPSNSASEEESGKPFQCPICGLVIKRKSYWKRH
MVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKL
HMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSACLGQQREGGGTELVGTMMTSNTPE
RTSQGGAGVSPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVANSASALFS
QDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEGESLSTTLPRSSYVFSPESEVS
APGVSEDALKPQEGKGSVLRRDVSVKAASELLMKLSAESYKETQMVKIKEEPMEVDIQ
DSHVSISPSRNVGYSTLIGREKTEPLQKMPEGRVPPERNLFSQDISVKMASELLFQLS
EKVSKEHNHTKENTIRTTTSPFFSEDTFRQSPFTSNSKELLPSDSVLHGRISAPETEK
IVLEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKC
RANLNQHLTVHSVKLVSTDTEDIVSAVTSEGSDGKKHPYYYSCHVCGFETELNVQFVS
HMSLHVDKEQWMFSICCTACDFVTMEEAEIKTHIGTKHTGEDRKTPSESNSPSSSSLS
ALSDSANSKDDSDGSQKNKGGNNLLVISVMPGSQPSLNSEEKPEKGFECVFCNFVCKT
KNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW"
BASE COUNT 901 a 918 c 838 g 697 t
ORIGIN
1 gcccccacgg gggtttattt gatctcacat taaccaagga ggagaatgtg agaaaagggg
61 gaaaatgccc aggaggaagc aggagcagcc caagcgcctt ccctcacatg ttagtaggca
121 ggaagaggcg gagggagagc tcagtgaagg agaacactgg tatggaaact cttcagagac
181 tccgtcagaa gcatcctatg gggaagtcca ggagaactat aagttgtctc tggaggaccg
241 gatccaggag cagtccacgt ccccggacac ctccttggga agcacgactc ccagcagcca
301 cacgttggag ctggtggcac tggacagtga ggtcctgcga gactcactgc agtgtcaaga
361 tcacctttcc ccgggagtgt cttctttgtg tgacgatgac ccaggctcca acaagcccct
421 gagcagcaat ttgaggcggc tgctggaggc tggttccctc aaactcgatg ctgcagccac
481 ggctaatggc agagtggagt cccccgtaaa cgttggctcg aacctctcct tttccccgcc
541 ttcccaccac gcccagcagc tcagtgttct ggccaggaag ttggccgaga agcaggaaca
601 gaatgaccaa tacactccaa gtaaccgttt tatatggaat caaggtaagt ggttgccaaa
661 ctcaaccacc acctgcagct tgtctccgga ttcagccatc ctaaaactga aagctgcagc
721 caatgccgtt ctgcaggaca aatctctcac caggactgag gagaccatgc gatttgagtc
781 cttttcctcc ccttttagct cccagtctgc cagttctacc ttggccgctt tgtccaagaa
841 ggtcagtgaa agaagtttga ctcctggtca ggagcaccct ccaccggcca gctccttcct
901 ttccctggct tctatgacct cctcagcggc ccttctgaag gaggtggccg caagggctgc
961 gggcagtctt ctggctgaga aatcatcgct gctgcctgag gaccctctac cgcccccgcc
1021 ttcagagaag aaaccagaaa aagtcactcc gccacctcca ccgccacctc caccacctcc
1081 accaccacca ccacaatccc tggaattatt attactccca gttcctaagg gaagagtttc
1141 taaaccctcc aattcagcct cagaagagga aagtggaaag cctttccagt gtccaatatg
1201 tggtttggtt attaaaagga agagttactg gaagcggcac atggtgattc acacaggttt
1261 aaaaagtcat cagtgtccgc tctgtccatt ccggtgtgct cgcaaggaca atctcaaatc
1321 ccacatgaag gttcatcagc accaggatcg gggagagacc tttcagtgcc agctgtgccc
1381 ttttacttcc tcacgccact tcagcctgaa actccacatg cgttgccatc agcacttcct
1441 gaggacagaa gccaaggtga aggaggagat cccagaccca gatgtcaagg gatctcccca
1501 cctcagtgac agtgcctgcc tggggcagca aagggaagga ggagggacag agctagtggg
1561 gaccatgatg acgtctaaca ctccagagag gactagccag ggaggggctg gcgtctcgcc
1621 tttgctggtg aaggaggaac ccaaggaaga taacggcctg cccacctcct ttactttgaa
1681 tgctgccgac aggcccgcca accacacaaa gctgaaagac ccctccgagt atgtggccaa
1741 cagtgcgtca gcattgttca gccaggacat ctctgttaag atggcgtctg attttctcat
1801 gaagctgtca gctgcaaatc agaaggagcc catgaatctt aattttaaag tgaaagagga
1861 gcctaaggaa ggggagtccc taagcacgac tttgcctcgg tccagctatg tgttcagccc
1921 ggaatctgaa gtgtcagccc caggcgtctc tgaggacgca ctaaagcccc aggaagggaa
1981 gggaagtgtg ctaaggcggg atgtgtcagt caaagcagcc tctgaacttc tcatgaaact
2041 ctcagcggaa agctacaagg aaacacagat ggtgaagatt aaagaggaac ccatggaggt
2101 tgacatccag gactcccatg tctcgatatc acccagccgg aatgttggct acagcacttt
2161 aatcgggcga gagaaaaccg aacccttaca gaagatgcca gagggcagag tacccccaga
2221 gagaaacctc ttcagtcagg atatctctgt gaaaatggct tccgagctcc tctttcaact
2281 gtcagaaaaa gtgagcaaag agcacaatca tacaaaagaa aacaccatcc ggaccacgac
2341 cagccctttc ttttcagaag acacatttag acaatcacca ttcacctcca attcaaaaga
2401 actgctgccc agtgactccg tgctgcacgg aagaatatca gctccagaaa cagaaaagat
2461 agtcctagag gcaggaaatg gattaccatc ctggaaattc aatgaccagc tttttccctg
2521 tgacgtgtgt gggaaagtgt ttggccgaca gcagacattg tcccgacacc tctcgctgca
2581 cacagaggaa agaaaataca aatgccactt gtgcccctat gctgctaagt gccgtgcaaa
2641 tctgaaccag cacttgaccg tccattccgt gaagctggtg agtacagaca ccgaggacat
2701 tgtcagcgcc gtcacctctg aaggcagtga tgggaagaaa catccttatt attacagttg
2761 tcacgtgtgt ggatttgaga ccgagctcaa tgtccagttt gtcagccaca tgtcactcca
2821 cgtggacaag gagcagtgga tgttttcgat ctgctgcact gcctgcgact tcgtcaccat
2881 ggaggaagca gagataaaga ctcacattgg caccaagcac acaggggaag acaggaagac
2941 ccccagcgaa tcaaatagcc cctcttcatc ctccctctca gctctgagtg attcagccaa
3001 cagcaaagat gattcagatg gctcccagaa aaacaagggc gggaacaatc tgctggtcat
3061 ctctgtcatg cctgggagcc agccctcact gaacagtgag gaaaagccag agaaagggtt
3121 cgaatgtgtt ttttgcaact ttgtctgcaa gacgaagaac atgtttgagc gtcatctgca
3181 gatacacctc atcacccgga tgtttgagtg tgatgtgtgc cacaagttca tgaagacccc
3241 cgaacagctg ctggagcata agaaatgcca cactgtcccc accggtgggc tcaactcagg
3301 acagtggtga gtttcagact cctctaggtg cccattctgc atttattcca ccaa
//