LOCUS BC143551 2165 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
12, mRNA (cDNA clone MGC:177079 IMAGE:9052062), complete cds.
ACCESSION BC143551
VERSION BC143551.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2165)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: B Column: 2.
FEATURES Location/Qualifiers
source 1..2165
/db_xref="H-InvDB:HIT000502002"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177079 IMAGE:9052062"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CAGCATTA"
gene 1..2165
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/db_xref="GeneID:221074"
/db_xref="HGNC:HGNC:20860"
/db_xref="MIM:608734"
CDS 23..2098
/gene="SLC39A12"
/gene_synonym="bA570F3.1"
/codon_start=1
/product="SLC39A12 protein"
/protein_id="AAI43552.1"
/db_xref="GeneID:221074"
/db_xref="HGNC:HGNC:20860"
/db_xref="MIM:608734"
/translation="MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPA
DLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNF
EDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDSSFLS
QNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQ
GVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQR
KQNNIITHDQDYSNFSSSMEKESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFK
QMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHS
CEENYRLILQLFVGLAVGTLSGDALLHLIPQVLGLHKQEAPEFGHFHESKGHIWKLMG
LIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSAST
IQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSS
SESGVTTTIAILCHEIPHEMGDFAVLLSSGLSMKTAILMNFISSLTAFMGLYIGLSVS
ADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQTQRPWMMFLLQNFGLILGWLSLLLL
AIYEQNIKI"
BASE COUNT 598 a 512 c 461 g 594 t
ORIGIN
1 tcaaggtgga ggaagcgtgg aaatgtgctt ccggacaaag ctctcagtat cctgggtgcc
61 attgtttctt ctactcagcc gtgttttttc tactgagaca gacaaaccct cagcccagga
121 cagcagaagc cgtgggagtt caggccaacc ggcagacctg ctacaggttc tctctgctgg
181 tgaccaccca ccccacaacc actcaagaag cctcatcaaa acattgttgg agaaaactgg
241 gtgcccacgg aggagaaacg gaatgcaagg agattgcaat ctgtgctttg aaccagatgc
301 actattacta atagctggag gaaattttga agatcagctt agagaagaag tggtccagag
361 agtttctctt ctccttctct attacattat tcatcaggaa gagatctgtt cttcaaagct
421 caacatgagt aataaagagt ataaatttta cctacacagc ctactgagcc tcaggcagga
481 tgaagattcc tctttccttt cacagaatga gacagaagat atcttggctt tcaccaggca
541 gtactttgac acttctcaaa gccagtgtat ggaaaccaaa acgctgcaga aaaaatctgg
601 aatagtgagc agtgaaggtg ctaatgaaag tacgcttcct cagttggcag ccatgatcat
661 tactttgtcc ctccagggtg tttgtctggg acaaggaaac ttgccttccc cagactactt
721 tacagaatat attttcagtt ccttgaatcg tacgaatacc ctccgcctat cagaactaga
781 ccaactcctc aacactctct ggaccagaag tacttgtatc aaaaatgaga aaatccatca
841 atttcaaagg aaacaaaaca acataataac ccatgatcag gactattcta atttctcttc
901 atccatggaa aaagagtctg aggatggtcc agtttcctgg gatcagacct gcttctctgc
961 taggcagctg gtggagatat ttctacagaa gggcctctca ctcatttcta aggaggactt
1021 taagcaaatg agtccaggga tcatccagca gctcctcagc tgctcctgcc acttacccaa
1081 ggaccaacaa gcaaagctgc cacctaccac tctggagaaa tacggctaca gcacggtggc
1141 tgtcaccctt ctcacactgg gctccatgct ggggacagcg ctggtccttt tccatagctg
1201 tgaggagaac tacaggctta tcttacagct gtttgtgggc ttggccgtcg ggacactgtc
1261 tggggacgct ctgctccacc ttatccctca ggttcttggt ttacataagc aggaagcccc
1321 agaatttggg catttccatg aaagcaaagg tcatatttgg aaactgatgg gattaattgg
1381 aggcatccat ggatttttct tgatagaaaa atgttttatt cttcttgtat caccaaatga
1441 caagcagggc ctgtcattgg ttaatgggca cgtgggtcat tcccaccatc ttgcactcaa
1501 ctctgaatta agtgaccagg caggcagagg caaatctgct tcaactatcc agttgaaaag
1561 cccagaagat tcacaggcag ctgaaatgcc tataggcagt atgacagcct ccaacagaaa
1621 atgtaaagcc attagcttgt tagcaatcat gattctggtt ggggacagcc tgcataattt
1681 tgcagatggc ctagccatag gagcagcctt ctcatcatca tccgagtcag gagtgaccac
1741 tacgattgct atcttgtgtc atgaaatccc acatgaaatg ggagactttg ccgtgctctt
1801 aagctctgga ctttctatga agactgccat cctgatgaat tttataagct ccctaactgc
1861 cttcatggga ttatacattg gcctttccgt gtcagctgat ccatgtgttc aagactggat
1921 cttcacagtc actgctggga tgttcttata tttatccttg gttgaaatgc ttcctgaaat
1981 gactcatgtt caaacacaac gaccctggat gatgtttctc ctgcaaaact ttggattgat
2041 cctaggttgg ctttctctcc tgctcttggc tatatatgag caaaatatta aaatataagt
2101 gaggatcttc aacatctttc aaaaatgcat ttatatagtc ttactttgtt tctttcattg
2161 cactc
//