LOCUS BC143539 1677 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone IMAGE:9052050), partial cds. ACCESSION BC143539 VERSION BC143539.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1677) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1677) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 15 Row: P Column: 7. FEATURES Location/Qualifiers source 1..1677 /db_xref="H-InvDB:HIT000501990" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:9052050" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCAGCTCT" gene <1..1677 /gene="CCDC55" /gene_synonym="HSPC095" /db_xref="GeneID:84081" /db_xref="HGNC:HGNC:25305" CDS <1..1607 /gene="CCDC55" /gene_synonym="HSPC095" /codon_start=3 /product="CCDC55 protein" /protein_id="AAI43540.1" /db_xref="GeneID:84081" /db_xref="HGNC:HGNC:25305" /translation="VQRTREQDGDSGQATSVSESLQREAAKKQAMKQTKLEIQKALAE DATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKRMEKKI QREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKRAAALEACLDVTKQKDLSGFY RHLLNQAVGEEEVPKCSFREARSGIKEEKSRGFSNEVSSKNRIPQEKCILQTDVKVEE NPDADSDFDAKSSADDEIEETRVNCRREKVIETPENDFKHHRSQNHSRSPSEERGHST RHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTDRDYRKERDSHRHREASHRDSHWKR HEQEDKPRARDQRERSDRVWKREKDREKYSQREQERDRQQNDQNRPSEKGEKEEKSKA KEEHMKVRKERYENNDKYRDREKREVGVQSSERNQDRKESSPNSRAKDKFLDQERSNK MRNMAKDKERNQEKPSNSESSLGAKHRLTEEGQEKGKEQERPPEAVSKFAKRNNEETV MSARDRYLARQMARVNAKTYIEKEDD" BASE COUNT 703 a 273 c 441 g 260 t ORIGIN 1 acgttcagcg gacacgggag caagatggcg attccgggca ggcaacctct gtgagtgaaa 61 gccttcagag ggaagctgct aagaagcagg ccatgaaaca gaccaaactg gaaatccaga 121 aggcccttgc agaagatgct actgtgtatg aatatgacag tatttatgat gaaatgcaga 181 aaaaaaagga ggaaaataat cccaaattgc ttttggggaa agacagaaag cccaagtata 241 ttcacaactt gctaaaagca gttgagatca gaaaaaagga acaggaaaaa agaatggaaa 301 agaaaataca gagagaacga gaaatggaaa agggggagtt tgatgataaa gaagcatttg 361 tgacatctgc atataagaaa aaactgcaag agagagctga agaagaagaa agagaaaaga 421 gggctgctgc actggaagca tgtttggatg taaccaagca gaaagatctc agtggatttt 481 ataggcacct attaaatcaa gcagttggtg aagaggaagt acctaaatgc agctttcgtg 541 aagccagatc tggtataaag gaagaaaaat caaggggctt ctccaatgaa gtaagttcaa 601 aaaacagaat accacaagag aaatgcattc ttcaaactga tgtgaaagta gaggaaaacc 661 cagatgcaga cagtgacttc gatgctaaga gcagtgcgga tgatgaaata gaagaaacta 721 gagtgaactg cagaagggaa aaggtcatag agacccctga gaatgacttc aagcaccaca 781 ggagtcaaaa ccactctcgg tcacctagtg aagaaagagg gcacagtacc aggcaccaca 841 cgaaaggatc acgaacgtcg agaggacatg agaaaaggga agatcagcac cagcagaagc 901 aatccagaga ccaagagaac cattacactg accgtgatta ccggaaagaa agggattctc 961 ataggcacag agaggccagt catagagatt cccattggaa gaggcatgaa caggaagata 1021 aaccaagggc gagggaccaa agagaaagaa gtgacagagt atggaaaagg gagaaagata 1081 gggagaaata ttcccaaaga gaacaagaaa gagatagaca acaaaatgat cagaaccgac 1141 ccagtgagaa aggagagaag gaagagaaaa gcaaagcaaa ggaagagcat atgaaagtaa 1201 ggaaggaaag atatgaaaat aatgataaat acagagatag agaaaaacga gaggtaggtg 1261 ttcagtcttc agaaagaaat caagacagaa aggaaagcag cccaaattct agggcaaagg 1321 ataaatttct tgaccaagaa agatccaaca aaatgagaaa catggcaaag gacaaagaaa 1381 gaaaccaaga gaaaccctct aattctgaat catcactggg agcaaaacac agactcacag 1441 aggaagggca agagaagggt aaagaacaag agagaccacc tgaggcagtg agcaagtttg 1501 caaagcggaa caatgaagaa actgtaatgt cagctagaga caggtacttg gccaggcaga 1561 tggcgcgggt taatgcaaag acctatattg agaaagaaga tgattgatgg ctaccccaag 1621 agaaagattt aaggaagcac agaaaactgt aattcctgga acctgctgcg taaaacc //