LOCUS BC143520 3534 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens STON1-GTF2A1L readthrough transcript, mRNA (cDNA clone
MGC:177046 IMAGE:9052029), complete cds.
ACCESSION BC143520
VERSION BC143520.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3534)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3534)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: P Column: 3.
FEATURES Location/Qualifiers
source 1..3534
/db_xref="H-InvDB:HIT000501971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177046 IMAGE:9052029"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCCCGGTC"
gene 1..3534
/gene="STON1-GTF2A1L"
/gene_synonym="SALF"
/db_xref="GeneID:286749"
/db_xref="HGNC:HGNC:30651"
CDS 28..3435
/gene="STON1-GTF2A1L"
/gene_synonym="SALF"
/codon_start=1
/product="STON1-GTF2A1L protein"
/protein_id="AAI43521.1"
/db_xref="GeneID:286749"
/db_xref="HGNC:HGNC:30651"
/translation="MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNL
PGLREFPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVL
YPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQA
ESLGFQIDDLPQFQYFREDCAFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQ
KSLNKCSLNYICEKLEHLQSAENQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGW
SFMLRIPEKKNMMSSRQWGPIFLKVLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPK
VENFSVAGKIHTVKIEHVSYTEKRKYHSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTT
VEEELMKLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNG
NLECFLTLNDLELPKRDESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLD
ACRFELMRFKTLYNGDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCD
NIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRRACLGSLHELESEPVIQVTVGSAKY
ESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCA
SRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIEDVIEGVRNLFAEEGIEEQVL
KDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTGHLYKVNVPIMV
TETSGRAGILQHPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAI
LPSGPVDRKHLENATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTN
SNVESVLSGSASMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNI
EEPSNIPVSEKDSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFL
GNIDGGDLKVPEEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLF
DTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW"
BASE COUNT 1070 a 737 c 757 g 970 t
ORIGIN
1 tgacaagacc acaatctgat cccaaagatg tgctccacaa atccaggcaa atgggtcacc
61 tttgatgatg atcctgctgt tcaatcttct caaaagtcaa agaattttcc tctggagaat
121 caaggtgtct gtagaccaaa tggactgaag ctgaaccttc ctggcctcag ggaatttccc
181 agtggatctt cctccaccag cagcactcct ctctcctccc ccattgtaga tttttatttc
241 agtccaggac ctccaagtaa ctctcctctt tctacaccta ccaaagactt cccaggtttt
301 cctggcatcc ccaaagcagg gactcatgtg ctttatccta ttccagaatc atcttcagac
361 agcccactcg caatatcagg aggagaatct tccttactgc ctaccagacc aacatgttta
421 tcccatgcct tgttacccag tgaccactca tgtacacatc caactcccaa agtaggtctt
481 ccagatgaag ttaatcctca acaggctgaa agcctaggat tccaaattga tgatctcccc
541 cagtttcagt attttcgaga ggactgtgct ttttcaagtc cattttggaa agatgaaggc
601 agtgattccc atttcaccct tgacccacca ggaagcaaaa agatgttctc atcaagaaac
661 aaggagatgc ctattgacca aaaaagccta aataagtgtt cactcaacta tatctgtgag
721 aagcttgaac atctccagtc agctgagaac caagactcac ttagaagttt gtctatgcac
781 tgtctatgtg ctgaagaaaa tgcctcttcc tttgtccccc acacactctt caggagtcag
841 ccaaaatctg gatggtcttt catgctgaga attcctgaga agaagaatat gatgtcttcc
901 cggcaatggg gaccaatttt tctgaaagtt ttgcctggag gaattttgca gatgtattat
961 gaacagggat tagaaaaacc atttaaagag atacagcttg atccatattg taggctttct
1021 gaacccaagg ttgagaactt cagtgtagca ggaaaaatcc acactgtgaa gattgaacat
1081 gtgtcttaca cagaaaaaag gaaataccat tctaagacag aagtagttca tgaacctgac
1141 atagagcaga tgctgaagtt ggggtccaca tcgtaccatg acttccttga ctttctgact
1201 actgtggagg aggagctgat gaagttgcca gctgtttcaa aaccaaaaaa gaactacgag
1261 gagcaagaaa tttccttgga aattgtggac aacttttggg gtaaagtcac aaaagaagga
1321 aaatttgttg aaagtgctgt gataactcaa atttattgcc tctgctttgt gaatgggaac
1381 ctggaatgct ttttaacctt gaatgacctt gagttgccga agcgagatga atcctattat
1441 gagaaggact cagaaaaaaa ggggattgat attcttgact accattttca taagtgtgtg
1501 aatgtacaag aatttgagca atcaagaatc attaagtttg tacctctgga tgcctgccgg
1561 tttgagctga tgcgtttcaa gactttgtat aatggggata atcttccctt ttccttgaag
1621 tctgtagtgg ttgtccaggg agcatacgtg gaacttcagg cttttgtcaa catggcctca
1681 ttggcgcaga ggtcatccta tgctggttcc ttaaggtcct gtgacaatat aaggatacac
1741 tttcctgtcc catcgcagtg gatcaaggcc ctttggacca tgaacctcca gaggcagaag
1801 tctctgaaag ctaaaatgaa ccgccgagca tgtctgggga gtttacatga acttgaatct
1861 gaacctgtca ttcaagtcac tgtggggtca gcaaaatatg agagtgccta ccaggcagtg
1921 gtatggaaga tagatcggct tccagacaaa aattcaagtc tagatcatcc ccattgtctg
1981 tcatacaaat tagagcttgg atcagaccaa gaaattccct ctgattggta tccatttgct
2041 actgttcagt tttccgtgcc tgacacctgt gcctcaagga cagaggtcag gtctctggga
2101 gtggagagtg atgtccagcc acagaaacat gttcagcagc gagcttgcta caacatccag
2161 cctaaactct acagatctgt aattgaagat gtaattgaag gagttcggaa tctatttgct
2221 gaagaaggta tagaggaaca agttttaaaa gacttgaagc agctctggga aaccaaggtt
2281 ttgcagtcta aagcaacaga agacttcttc agaaatagca tccaatcacc tctgtttact
2341 cttcagttgc cgcacagctt gcaccaaaca ttgcaatcgt caacaggtca cctttataaa
2401 gtcaatgtac caattatggt gacagagact tctggaagag caggtattct tcagcatcca
2461 attcagcaag tatttcaaca gcttggccag ccttcagtaa tacaaactag tgttccacaa
2521 ttgaatccat ggtctcttca agcaactact gaaaaatcac agagaattga aaccgtgcta
2581 cagcaacccg caattctacc ttctgggcca gtagatagga aacacttaga aaatgccacc
2641 agtgatatac ttgtatctcc tggaaatgag cataaaatcg tgcctgaagc tttgttgtgt
2701 catcaggaaa gttctcacta tatcagtctt ccaggtgttg tattttctcc acaggtctct
2761 caaacaaatt ctaatgtgga gtcagtgctc agtggttcag ctagcatggc tcaaaatctg
2821 catgatgagt ccctctccac aagccctcat ggggctctcc accagcacgt gactgatatt
2881 cagcttcata ttcttaaaaa taggatgtat ggatgtgatt ctgtaaagca accaagaaat
2941 atagaggaac ccagcaacat acctgtatca gagaaggatt ctaattctca ggtggattta
3001 agcattcggg ttactgatga tgatattggt gaaataattc aagtagatgg aagcggtgat
3061 acatcttcca atgaagaaat aggaagtaca agagatgcag atgagaatga atttctaggg
3121 aatattgacg ggggagatct gaaggtacct gaagaagaag ctgacagtat ttcaaatgag
3181 gattcagcca caaacagtag tgataatgaa gaccctcaag taaacattgt agaagaggac
3241 cctttaaatt ctggagatga tgttagtgaa caggatgtgc cagacctgtt tgacacggat
3301 aatgtaattg tctgtcagta tgataagatt catcgaagca agaacaaatg gaaattctat
3361 ttgaaagatg gtgttatgtg ttttggaggg agagactatg tatttgcaaa agccattggt
3421 gatgcagagt ggtaaacctt gtgagctcag tacatctatt ttgtgaacat cagttggact
3481 atattgcata ttgtgaattc atttttattt tgaatatagt ccagcacaga gctg
//