LOCUS BC143519 3735 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens zinc finger and AT hook domain containing, mRNA (cDNA
clone MGC:177045 IMAGE:9052028), complete cds.
ACCESSION BC143519
VERSION BC143519.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3735)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3735)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: P Column: 1.
FEATURES Location/Qualifiers
source 1..3735
/db_xref="H-InvDB:HIT000501970"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177045 IMAGE:9052028"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GAAATTTC"
gene 1..3735
/gene="ZFAT"
/gene_synonym="AITD3"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
CDS 101..3646
/gene="ZFAT"
/gene_synonym="AITD3"
/codon_start=1
/product="ZFAT protein"
/protein_id="AAI43520.1"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
/translation="METRAAENTAIFMCKCCNLFSPNQSELLSHVSEKHMEEGVNVDE
IIIPLRPLSTPEPPNSSKTRDEFLVMKRKRGRPKGSTKKSSTEEELAENIVSPTEDSS
LAPEEGNSLPPSSLECSKCCRKFSNTRQLRKHICIIVLNLGEEEGEAGATKIVPVEAG
PPETGATNSETTSADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVF
KFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSK
GHLKVHIERVHKKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTR
EGKRQLLYDCHICERKFKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELHVRKH
PFVYVCAVCRKKFVSSIRLRTHIKEVHGAAQEALVFTSSINQSFCLLEPGGDIQQEAL
GDQLQLVEEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAEST
ALPPCELETTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQG
EVITLLLSKAQSAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLP
PVAGGGDTITHQPDSCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYGDLEC
EYCGKLFWYQVHFDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPT
DGCDYSTPDKYKLQAHLKVHTALDKRSYSCPVCEKSFSEDRLIKSHIKTNHPEVSMST
ISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYAT
RSKSNLKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCDYTAA
QKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGELAAEV
LIQQGGLKCPVCSFVYGTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPSTQYL
HITEAEEDVQGTQAAVAALQDLRYTSESGDRLDPTAVNILQQIIELGAETHDATALAS
VVAMAPGTVTVVKQVTEEEPSSNHTVMIQETVQQASVELAEQHHLVVSSDDVEGIETV
TVYTQGGEASEFIVYVQEAMQPVEEQAVEQPAQEL"
BASE COUNT 948 a 1022 c 1042 g 723 t
ORIGIN
1 aaagcgaagc gtcagcaggg cgccccgccc cctcggtcgg cacgggaggg ggcccggaag
61 agcccgaggc tttttttttc ctccgcggtg gggcgttgcc atggagacgc gggcggcaga
121 aaacacggcc atctttatgt gtaaatgttg taacctcttc tcaccaaatc agtcggaact
181 cctctcccac gtttcagaga agcacatgga agaaggggtt aatgttgatg agattattat
241 tccccttagg cctctgagta cacctgaacc ccccaactca agcaaaacca gagatgagtt
301 tttggtcatg aagaggaaga gaggcaggcc taaggggtcc acgaagaagt ccagcacaga
361 agaggagctg gcagaaaaca tcgtgagtcc gactgaggac agctcgctgg ctccggagga
421 agggaacagc ctgcctccaa gcagcttgga gtgtagcaag tgctgtcgga agttctccaa
481 cacgcgccag ctgcggaagc acatctgcat tatcgtgctg aatttgggtg aggaggaagg
541 agaagcaggt gctaccaaga ttgtgccagt ggaggctggg ccccctgaaa caggagctac
601 aaattctgag accacttcag cagacctggt gcctcggaga ggctaccagg aatacgccat
661 tcagcagaca ccttatgagc aaccaatgaa gtcaagcagg ctaggtccca ctcagctcaa
721 aatcttcact tgtgaatact gcaacaaggt cttcaagttc aagcactcgc tgcaggccca
781 cctgaggatc cacaccaatg aaaagccata caagtgcccc cagtgcagct atgccagtgc
841 catcaaggcc aacctcaatg tgcacctgcg caagcacact ggagagaagt tcgcctgcga
901 ctactgctcg ttcacctgcc tgagcaaggg ccacctcaag gtgcacatcg agcgagtgca
961 caagaagatc aagcagcact gccgcttctg caagaagaag tactctgacg tcaagaacct
1021 catcaagcac atccgagacg cgcatgaccc acaggacaag aaggtcaaag aggccttgga
1081 cgagctctgc ctgatgacga gggagggcaa gcggcagctg ctctatgact gccacatctg
1141 tgagcgcaag ttcaagaacg agctggaccg cgaccgccat atgctggtcc acggagacaa
1201 gtggcctttt gcctgtgagc tctgtggcca tggggccacc aagtaccagg cgctggaact
1261 gcatgtcagg aagcacccct tcgtgtacgt ctgtgccgtc tgccgcaaga agttcgtcag
1321 ctccatcagg ctgcgcaccc acatcaaaga ggtgcacggg gctgcccagg aggccttggt
1381 cttcaccagt tccatcaacc agagcttctg cctcctggaa cctggtgggg acatccagca
1441 agaagctctg ggggaccagc tacagctggt ggaagaggag tttgccctcc agggcgtgaa
1501 tgcactcaag gaagaggcct gtcctgggga cactcagctg gaggagggcc ggaaggagcc
1561 ggaggcccct ggggaaatgc ctgccccagc tgtgcacctg gcctccccgc aggccgaaag
1621 cacagccctg ccaccctgtg agctggaaac caccgtggtc tcctcctcag acctgcattc
1681 tcaagaggtg gtttcagatg attttttgtt gaaaaatgat acctcctccg cagaggctca
1741 tgctgctcct gagaagcccc cagacatgca gcacagaagc tcagtccaga cgcaaggtga
1801 agtgatcaca ctactgctgt ccaaggccca gagtgctggg tcagatcagg aaagccatgg
1861 cgcccagagc cccctagggg aagggcagaa catggctgtg ctttcagctg gtgacccaga
1921 tcccagcagg tgtctcaggt caaacccagc tgaggcctca gacctcctcc ctccagtagc
1981 tggtggtggg gacaccatca cacatcagcc tgactcttgc aaagctgccc ctgagcaccg
2041 gtcaggcatc accgctttca tgaaggtcct gaacagttta cagaagaagc aaatgaacac
2101 cagcttgtgt gagcggatcc ggaaggttta tggagacctg gagtgtgaat actgtggcaa
2161 acttttttgg taccaagtgc attttgatat gcatgtccgc acccacaccc gggaacatct
2221 gtattattgc tctcagtgtc attattcttc catcaccaaa aactgcctta aacgccacgt
2281 aattcagaaa cacagtaaca tcttgctgaa gtgtcccacc gacggctgtg actactcaac
2341 tccagataaa tataagctac aggcacatct taaagttcac acagcactgg acaaaaggag
2401 ttattcctgt cctgtttgtg aaaagtcttt ttcagaggat cgattgataa agtcacatat
2461 caagaccaac catcctgagg tctccatgag caccatttct gaggttctcg ggaggagggt
2521 tcagctgaaa gggctaattg gaaagagagc catgaaatgc ccatattgtg acttttattt
2581 catgaagaat ggctcagacc ttcagcgtca tatttgggct catgaaggtg tgaagccctt
2641 caagtgttct ttgtgtgagt atgcaactcg tagcaagagt aacctcaagg ctcatatgaa
2701 tcgtcacagc actgagaaaa cccacctatg tgacatgtgt ggcaagaaat tcaaatcaaa
2761 agggacactg aaaagtcaca aactccttca cactgcagat gggaagcagt ttaagtgcac
2821 ggtgtgtgac tacacagcgg cccagaagcc acagctgctg cggcacatgg aacagcatgt
2881 ctccttcaag cctttccgct gtgcccattg ccattactcc tgcaacatat ctggctctct
2941 gaagcggcac tacaacagga agcaccctaa tgaggagtat gccaacgtgg gcaccgggga
3001 gctggcagcg gaggtgctca tccagcaagg tggtttgaag tgtcctgttt gcagctttgt
3061 atatggcacc aaatgggagt tcaataggca cttgaagaac aaacatggct tgaaggtggt
3121 ggaaattgat ggagacccca agtgggagac agcaacagaa gctcctgagg agccctccac
3181 ccagtatctc cacatcacag aggccgaaga agacgttcaa gggacacagg cagcggtggc
3241 cgcgctccag gacctgagat acacctctga gagtggcgac cgactggacc ccacggccgt
3301 gaacatcctg cagcagatca ttgagctggg cgccgagacc catgacgcca ctgcccttgc
3361 ctcggtggtt gccatggcac cagggacggt gactgtggtt aagcaggtca ccgaggagga
3421 gcccagctcc aaccacacgg tcatgatcca ggagacggtc cagcaagcgt ccgtggagct
3481 tgccgagcag caccacctgg tggtgtcctc cgacgacgtg gagggcattg agacggtgac
3541 tgtctacacg cagggcgggg aggcctcgga gttcatcgtc tacgtgcagg aggccatgca
3601 gcctgtggag gagcaggctg tggagcagcc ggcccaggaa ctctagagga catgtggcat
3661 cggatggcca cagggcgggg ctgccaggct ctgcaggcac ccagggtggg gaggccaccc
3721 ttcctgccct acccg
//