LOCUS       BC143494                2612 bp    mRNA    linear   HUM 08-JAN-2009
DEFINITION  Homo sapiens shroom family member 1, mRNA (cDNA clone MGC:177019
            IMAGE:9052002), complete cds.
ACCESSION   BC143494
VERSION     BC143494.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2612)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 15 Row: E Column: 6.
FEATURES             Location/Qualifiers
     source          1..2612
                     /db_xref="H-InvDB:HIT000501947"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:177019 IMAGE:9052002"
                     /tissue_type="Liver, PCR rescued clones"
                     /clone_lib="NIH_MGC_291"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: TGCGATCA"
     gene            1..2612
                     /gene="SHROOM1"
                     /gene_synonym="APXL2"
                     /db_xref="GeneID:134549"
                     /db_xref="HGNC:HGNC:24084"
                     /db_xref="MIM:611179"
     CDS             33..2591
                     /gene="SHROOM1"
                     /gene_synonym="APXL2"
                     /codon_start=1
                     /product="SHROOM1 protein"
                     /protein_id="AAI43495.1"
                     /db_xref="GeneID:134549"
                     /db_xref="HGNC:HGNC:24084"
                     /db_xref="MIM:611179"
                     /translation="MEALGPGGDRASPASSTSSLDLWHLSMRADSAYSSFSAASGGPE
                     PRTQSPGTDLLPYLDWDYVRVVWGGPGPAPPDAALCTSPRPRPAVAARSGPQPTEVPG
                     TPGPLNRQATPLLYALAAEAEAAAQAAEPPSPPASRAAYRQRLQGAQRRVLRETSFQR
                     KELRMSLPARLRPTVPARPPATHPRSASLSHPGGEGEPARSRAPAPGTAGRGPLANQQ
                     RKWCFSEPGKLDRVGRGGGPARECLGEACSSSGLPGPEPLEFQHPALAKFEDHEVGWL
                     PETQPQGSMNLDSGSLKLGDAFRPASRSRSASGEVLGSWGGSGGTIPIVQAVPQGAET
                     PRPLFQTKLSRFLPQKEAAVMYPAELPQSSPADSEQRVSETCIVPAWLPSLPDEVFLE
                     EAPLVRMRSPPDPHASQGPPASVHASDQPYGTGLGQRTGQVTVPTEYPLHECPGTAGA
                     DDCWQGVNGSVGISRPTSHTPTGTANDNIPTIDPTGLTTNPPTAAESDLLKPVPADAL
                     GLSGNDTPGPSHNTALARGTGQPGSRPTWPSQCLEELVQELARLDPSLCDPLASQPSP
                     EPPLGLLDGLIPLAEVRAAMRPACGEAGEEAASTFEPGSYQFSFTQLLPAPREETRLE
                     NPATHPVLDQPCGQGLPAPNNSIQGKKVELAARLQKMLQDLHTEQERLQGEAQAWARR
                     QAALEAAVRQACAPQELERFSRFMADLERVLGLLLLLGSRLARVRRALARAASDSDPD
                     EQASLLQRLRLLQRQEEDAKELKEHVARRERAVREVLVRALPVEELRVYCALLAGKAA
                     VLAQQRNLDERIRLLQDQLDAIRDDLGHHAPSPSPARPPGTCPPVQPPFPLLLT"
BASE COUNT          447 a          912 c          827 g          426 t
ORIGIN      
        1 gccacccagc ctcagcactc atctgcgcag ccatggaggc cctgggacct gggggcgacc
       61 gcgcctcccc ggcctcgtcc actagcagcc tggacctgtg gcatctgtcc atgcgcgcgg
      121 actcggccta cagctctttc tccgcagcct ccggcggccc cgagccgcgc acgcagtcgc
      181 cggggacaga cctccttcct tacctagact gggactacgt gcgtgtggtt tggggcggcc
      241 cgggccccgc cccgcccgac gctgcccttt gcacatcccc gcggccccgg cccgcggttg
      301 cagcccgcag tgggccgcag ccaacagagg tcccggggac cccgggacca ctgaacaggc
      361 aggccacccc gctgctgtac gcgctggcgg ccgaggcgga ggccgcggcg caggctgccg
      421 agccgcccag cccgccggcc tcgagggccg cctaccgcca gcggcttcag ggcgcgcagc
      481 ggcgagtgct ccgggagacg tcgttccagc gcaaggagct ccgcatgagc ctgcccgccc
      541 gtctgcggcc cactgtccca gcgcggcccc cggcgactca cccgcgctcc gcctcgctca
      601 gccacccggg cggggagggg gagccggcgc gctcccgggc tcccgcgcca ggaactgccg
      661 gccggggtcc cctcgccaac cagcagcgga agtggtgctt ctcagagcca ggaaagctgg
      721 atcgtgtggg tcggggcggt gggccggcgc gggaatgcct gggtgaggcc tgctccagct
      781 ctggcctccc tgggcccgag cccttggagt tccagcatcc ggcgctggct aagtttgaag
      841 atcacgaggt cggatggctg cccgagacgc aaccccaagg ctccatgaac ctggactccg
      901 ggtccttgaa gctcggtgat gccttcaggc ccgccagtcg gagtcggagc gcttcaggcg
      961 aagtcttggg ttcctgggga ggatcaggag ggaccatacc cattgtccag gctgttcccc
     1021 aaggagcaga aacccccaga ccattgtttc agaccaaact ttccaggttc ttgcctcaga
     1081 aagaggctgc ggtgatgtat cctgcagagt taccccagag cagccctgct gacagtgaac
     1141 agagggtctc agagacctgc attgtgcctg cctggctccc ctcccttcct gatgaagtgt
     1201 tcctagaaga ggccccactg gtcagaatga gatcaccacc agacccccat gcctcccagg
     1261 ggcccccagc cagtgtccat gcctctgacc agccgtatgg aactggctta ggccaaagaa
     1321 ctggccaggt tacagtcccc acagagtacc cgctccatga gtgtccagga actgcagggg
     1381 cagatgactg ctggcagggg gtgaatggtt ctgtaggtat ttccaggccc acaagccaca
     1441 cccccactgg gactgcaaat gataacatcc caactattga ccccactgga ctgaccacca
     1501 atccccccac agctgcagag agtgacctcc tcaaacctgt cccagctgat gccttgggac
     1561 tttcaggcaa tgatactcca ggtccctctc acaatactgc cctagccagg ggcactggcc
     1621 agcctggttc caggcccaca tggcctagtc agtgcctcga ggagctggtt caggagctgg
     1681 ccagattaga tccctctcta tgtgaccctc ttgcttccca gcccagccca gagccacccc
     1741 tgggcctgct ggatggactg attcctttag cagaggtccg ggctgcaatg cggcctgcct
     1801 gtggggaggc tggagaggag gctgccagta cttttgagcc agggtcctat cagttcagct
     1861 tcacccagct cctgccggct cctcgggagg agacaaggct tgaaaaccct gccacccacc
     1921 ctgtgcttga ccagccatgt gggcaggggc tccctgcacc aaacaacagc atccagggca
     1981 agaaagtgga gctggccgcc cgcctccaaa agatgcttca ggaccttcac acggagcagg
     2041 agcggctgca gggggaggca caagcgtggg ccaggcgcca agcggctctg gaggctgcag
     2101 tgcgccaggc ctgtgcccct caggagctgg agcggttcag ccggttcatg gccgacctag
     2161 agcgcgtgct tggccttctg ctgctgctgg gcagtcgcct ggcgcgcgtg cgccgcgccc
     2221 tggcccgggc ggcctcagac agcgaccctg atgagcaggc ctccctgctg cagcgactcc
     2281 ggctcctgca gcggcaggag gaggacgcca aggagctgaa ggagcacgta gcgcggcgcg
     2341 agcgggccgt gcgggaggtg ctggtgcgag cactaccggt ggaggagctg cgcgtctatt
     2401 gcgccctgct ggcgggcaag gccgccgtcc tggcccagca gcgcaacctg gacgagcgca
     2461 tccgcctcct tcaggaccaa ctggacgcca tcagggacga ccttggccat catgccccgt
     2521 ctcccagccc ggcgcggccc ccagggacct gtcctccagt tcagccgccc ttccctcttc
     2581 tccttacata gttataggtg gagagggtgg gg
//