LOCUS BC143479 1459 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens GATA binding protein 4, mRNA (cDNA clone MGC:177004
IMAGE:9051987), complete cds.
ACCESSION BC143479
VERSION BC143479.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1459)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1459)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: F Column: 19.
FEATURES Location/Qualifiers
source 1..1459
/db_xref="H-InvDB:HIT000501933"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177004 IMAGE:9051987"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_314"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GCAGTGCC"
gene 1..1459
/gene="GATA4"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="MIM:600576"
CDS 81..1412
/gene="GATA4"
/codon_start=1
/product="GATA4 protein"
/protein_id="AAI43480.1"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="MIM:600576"
/translation="MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRV
PSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPP
PVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGREQYGRAGFAGSYSS
PYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPAARHPNLVDMFDDFSEGREC
VNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQ
TTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAA
PSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSG
HGPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA"
BASE COUNT 238 a 544 c 452 g 225 t
ORIGIN
1 gccgtcgttt tctctccccg cgtggctcct tgacctgcga gggagagaga ggacaccgaa
61 gccgggagct cgcagggacc atgtatcaga gcttggccat ggccgccaac cacgggccgc
121 cccccggtgc ctacgaggcg ggcggccccg gcgccttcat gcacggcgcg ggcgccgcgt
181 cctcgccagt ctacgtgccc acaccgcggg tgccctcctc cgtgctgggc ctgtcctacc
241 tccagggcgg aggcgcgggc tctgcgtccg gaggcgcctc gggcggcagc tccggtgggg
301 ccgcgtctgg tgcggggccc gggacccagc agggcagccc gggatggagc caggcgggag
361 ccgacggagc cgcttacacc ccgccgccgg tgtcgccgcg cttctccttc ccggggacca
421 ccgggtccct ggcggccgcc gccgccgctg ccgcggcccg ggaagctgcg gcctacagca
481 gtggcggcgg agcggcgggt gcgggcctgg cgggccgcga gcagtacggg cgcgccggct
541 tcgcgggctc ctactccagc ccctacccgg cttacatggc cgacgtgggc gcgtcctggg
601 ccgcagccgc cgccgcctcc gccggcccct tcgacagccc ggtcctgcac agcctgcccg
661 gccgggccaa cccggccgcc cgacacccca atctcgtaga tatgtttgac gacttctcag
721 aaggcagaga gtgtgtcaac tgtggggcta tgtccacccc gctctggagg cgagatggga
781 cgggtcacta tctgtgcaac gcctgcggcc tctaccacaa gatgaacggc atcaaccggc
841 cgctcatcaa gcctcagcgc cggctgtccg cctcccgccg agtgggcctc tcctgtgcca
901 actgccagac caccaccacc acgctgtggc gccgcaatgc ggagggcgag cctgtgtgca
961 atgcctgcgg cctctacatg aagctccacg gggtccccag gcctcttgca atgcggaaag
1021 aggggatcca aaccagaaaa cggaagccca agaacctgaa taaatctaag acaccagcag
1081 ctccttcagg cagtgagagc cttcctcccg ccagcggtgc ttccagcaac tccagcaacg
1141 ccaccaccag cagcagcgag gagatgcgtc ccatcaagac ggagcctggc ctgtcatctc
1201 actacgggca cagcagctcc gtgtcccaga cgttctcagt cagtgcgatg tctggccatg
1261 ggccctccat ccaccctgtc ctctcggccc tgaagctctc cccacaaggc tatgcgtctc
1321 ccgtcagcca gtctccacag accagctcca agcaggactc ttggaacagc ctggtcttgg
1381 ccgacagtca cggggacata atcactgcgt aatcttccct cttccctcct caaattcctg
1441 cacggacctg ggacttgga
//