LOCUS BC143418 858 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens Parkinson disease 7 domain containing 1, mRNA (cDNA
clone MGC:176943 IMAGE:9051926), complete cds.
ACCESSION BC143418
VERSION BC143418.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: O Column: 20.
FEATURES Location/Qualifiers
source 1..858
/db_xref="H-InvDB:HIT000501873"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176943 IMAGE:9051926"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCACTGTT"
gene 1..858
/gene="PDDC1"
/db_xref="GeneID:347862"
/db_xref="HGNC:HGNC:26616"
CDS 22..681
/gene="PDDC1"
/codon_start=1
/product="PDDC1 protein"
/protein_id="AAI43419.1"
/db_xref="GeneID:347862"
/db_xref="HGNC:HGNC:26616"
/translation="MASERLPNRPACLLVASGAAEGVSAQSFLHCFTMASTAFNLQVA
TPGGKAMEFVDVTESNARWVQDFRLKAYASPAKLESIDGARYHALLIPSCPGALTDLA
SSGSLARILQHFHSESKPICAVGHGVAALCCATNEDRSWVFDSYSLTGPSVCELVRAP
GFARLPLVVEDFVKDSGACFSASEPDAVHVVLDRHLVTGQNASSTVPAVQNLLFLCGS
R"
BASE COUNT 139 a 308 c 251 g 160 t
ORIGIN
1 acccagcgcc gagcccgagc catggcgtcc gagcggctcc ctaacaggcc cgcctgtctg
61 ctcgtggcca gcggcgccgc cgaaggtgtg tcggcccagt ccttcctcca ctgtttcacg
121 atggccagca ccgccttcaa cctgcaggtg gccacccctg gggggaaagc catggaattt
181 gtggatgtga ctgagagcaa tgcacgctgg gtgcaagact tccgcctcaa ggcttacgcc
241 agccccgcca agctcgagtc catcgatggt gcccggtacc atgccctcct gatccccagc
301 tgtcctgggg ccctgaccga cctggccagc agtggctccc tggcccgtat cctgcagcac
361 ttccactctg agagcaaacc catctgcgcc gtcggccacg gtgtcgccgc cctgtgctgt
421 gccaccaacg aggacagatc ctgggtgttc gacagctaca gcctgacagg gccctctgtg
481 tgtgagctcg tcagggcccc cggcttcgcc cgcctgccgc tcgtggtgga ggacttcgtg
541 aaggattcgg gcgcctgctt cagtgcaagc gagcctgacg ctgtccacgt cgtgctggac
601 cgccacctgg tcacaggcca gaatgccagc tccactgtcc cggccgtgca gaacctgctc
661 ttcctctgtg gcagccggtg agggcaccag ggtgggcaca ttcctgccac atcagagctg
721 cacccggtgc ttttgcccaa gctttgacca cacgtctgtc ctgcaggaaa tgaacctgct
781 gggtagatgc accccctgag acagcccagg tgtctccaga ggcagccccg tctcaggctt
841 cagggacccc gcctcttc
//