LOCUS BC143397 2600 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9051904, with apparent retained
intron.
ACCESSION BC143397
VERSION BC143397.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2600)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2600)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: O Column: 4
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2600
/db_xref="H-InvDB:HIT000501853"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9051904"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CAATCACC"
BASE COUNT 770 a 569 c 640 g 621 t
ORIGIN
1 aggcggatcg ggtgttgcat ccatggagcg agctgagagc tcgagtacag aacctgctaa
61 ggccatcaaa cctattgatc ggaagtcagt ccatcagatt tgctctgggc aggtggtact
121 gagtctaagc actgcggtaa aggagttagt agaaaacagt ctggatgctg gtgccactaa
181 tattgatcta aagcttaagg actatggagt ggatcttatt gaagtttcag acaatggatg
241 tggggtagaa gaagaaaact tcgaaggctt aactctgaaa catcacacat ctaagattca
301 agagtttgcc gacctaactc aggttgaaac ttttggcttt cggggggaag ctctgagctc
361 actttgtgca ctgagcgatg tcaccatttc tacctgccac gcatcggcga aggttggaac
421 tcgactgatg tttgatcaca atgggaaaat tatccagaaa accccctacc cccgccccag
481 agggaccaca gtcagcgtgc agcagttatt ttccacacta cctgtgcgcc ataaggaatt
541 tcaaaggaat attaagaagc aggcatccgt gtaagttgca ccaatcagct tggacaagga
601 aaacgacagc ctgtggtatg cacaggtgga agccccagca taaaggaaaa tatcggctct
661 gtgtttgggc agaagcagtt gcaaagcctc attccttttg ttcagctgcc ccctagtgac
721 tccgtgtgtg aagagtacgg tttgagctgt tcggatgctc tgcataatct tttttacatc
781 tcaggtttca tttcacaatg cacgcatgga gttggaagga gttcaacaga cagacagttt
841 ttctttatca accggcggcc ttgtgaccca gcaaaggtct gcagactcgt gaatgaggtc
901 taccacatgt ataatcgaca ccagtatcca tttgttgttc ttaacatttc tgttgattca
961 gaatgcgttg atatcaatgt tactccagat aaaaggcaaa ttttgctaca agaggaaaag
1021 cttttgttgg cagttttaaa gacctctttg ataggaatgt ttgatagtga tgtcaacaag
1081 ctaaatgtca gtcagcagcc actgctggat gttgaaggta acttaataaa aatgcatgca
1141 gcggatttgg aaaagcccat ggtagaaaag caggatcaat ccccttcatt aaggactgga
1201 gaagaaaaaa aagacgtgtc catttccaga ctgcgagagg ccttttctct tcgtcacaca
1261 acagagaaca agcctcacag cccaaagact ccagaaccaa gaaggagccc tctaggacag
1321 aaaaggggta tgctgtcttc tagcacttca ggtgccatct ctgacaaagg cgtcctgaga
1381 cctcagaaag aggcagtgag ttccagtcac ggacccagtg accctacgga cagagcggag
1441 gtggagaagg actcggggca cggcagcact tccgtggatt ctgaggggtt cagcatccca
1501 gacacgggca gtcactgcag cagcgagtat gcggccagct ccccagggga caggggctcg
1561 caggaacatg tggactctca ggagaaagcg cctgaaactg acgactcttt ttcagatgtg
1621 gactgccatt caaaccagga agataccgga tgtaaatttc gagttttgcc tcagccaact
1681 aatctcgcaa ccccaaacac aaagcgtttt aaaaaagaag aaattctttc cagttctgac
1741 atttgtcaaa agttagtaaa tactcaggac atgtcagcct ctcaggttga tgtagctgtg
1801 aaaattaata agaaagttgt gcccctggac ttttctataa gttctttagc taaacgaata
1861 aagcagttac atcatgaagc acagcaaagt gaaggggaac agaattacag gaagtttagg
1921 gcaaagattt gtcctggaga aaatcaagca gccgaagatg aactaagaaa agagataagt
1981 aaaacgatgt ttgcagaaat ggaaatcatt ggtcagttta acctgggatt tataataacc
2041 aaactgaatg aggatatctt catagtggac cagcatgcca cggacgagaa gtataacttc
2101 gagatgctgc agcagcacac cgtgctccag gggcagaggc tcatagcacc tcagactctc
2161 aacttaactg ctgttaatga agctgttctg atagaaaatc tggaaatatt tagaaagaat
2221 ggctttgatt ttgttatcga tgaaaatgct ccagtcactg aaagggctaa actgatttcc
2281 ttgccaacta gtaaaaactg gaccttcgga ccccaggacg tcgatgaact gatcttcatg
2341 ctgagcgaca gccctggggt catgtgccgg ccttcccgag tcaagcagat gtttgcctcc
2401 agagcctgcc ggaagtcggt gatgattggg actgctctta acacaagcga gatgaagaaa
2461 ctgatcaccc acatggggga gatggaccac ccctggaact gtccccatgg aaggccaacc
2521 atgagacaca tcgccaacct gggtgtcatt tctcagaact gaccgtagtc actgtatgga
2581 ataattggtt ttatcgcaga
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