LOCUS BC143394 607 bp mRNA linear HUM 02-JAN-2009 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 20B, mRNA (cDNA clone IMAGE:9051900), complete cds. ACCESSION BC143394 VERSION BC143394.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 607) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 607) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 15 Row: I Column: 18 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..607 /db_xref="H-InvDB:HIT000501850_02" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:9051900" /tissue_type="Lung and heart, PCR rescued clones" /clone_lib="NIH_MGC_315" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TCACGCTA" gene 1..607 /gene="PTPN20B" /gene_synonym="bA42B19.1" /db_xref="GeneID:26095" /db_xref="HGNC:HGNC:23423" /db_xref="MIM:610631" CDS 84..521 /gene="PTPN20B" /gene_synonym="bA42B19.1" /codon_start=1 /product="PTPN20B protein" /protein_id="AAI43395.1" /db_xref="GeneID:26095" /db_xref="HGNC:HGNC:23423" /db_xref="MIM:610631" /translation="MSSPRDFRAEPVNDYEGNDSEAEDLNFRETLPSSSQENTPRSKV FENKVNSEKVKLSLRNFPHNDYEDVFEEPSESGSDPSMWTARGPFRRDRWSSEDEEAA GPSQALSPLLSVQHHGYSGPNERTTFWHGSNEGAVSLLLRYCA" BASE COUNT 175 a 126 c 143 g 163 t ORIGIN 1 gacctttggc ctgactcaca ggacactaag gctccttttc tgaagaagcc ttttaccagt 61 ctcatttagg ggatgggaac aacatgtctt cacctaggga ctttagagca gagcctgtaa 121 acgattatga gggaaatgac tctgaagcag aagacttgaa tttcagggag actttgcctt 181 catcaagtca ggaaaacaca cctagatcaa aggtttttga aaataaagtt aattcagaga 241 aggtaaaact ttctcttcgg aatttcccac ataatgatta tgaggatgtt tttgaagagc 301 cttcagaaag tggcagtgat cccagcatgt ggacagccag aggccccttc agaagagaca 361 ggtggagcag tgaggatgag gaggctgcag ggccatcaca ggctctctcc cctctacttt 421 ctgttcaaca tcatggatat agtggcccaa atgagagaac aacgttctgg catggttcaa 481 acgaaggagc agtatcactt ttgttacgat attgtgcttg aagttcttcg gaaacttctg 541 actttggatt aagaaagact tctgttgcct ctcacttgaa attaccaagt gggtttgcac 601 ctcctca //