LOCUS BC143276 3873 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens SEC24 family, member B (S. cerevisiae), mRNA (cDNA
clone MGC:176795 IMAGE:9051778), complete cds.
ACCESSION BC143276
VERSION BC143276.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: K Column: 9.
FEATURES Location/Qualifiers
source 1..3873
/db_xref="H-InvDB:HIT000501736"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176795 IMAGE:9051778"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GTCCAGTT"
gene 1..3873
/gene="SEC24B"
/gene_synonym="SEC24"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
CDS 99..3800
/gene="SEC24B"
/gene_synonym="SEC24"
/codon_start=1
/product="SEC24 family, member B (S. cerevisiae)"
/protein_id="AAI43277.1"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
/translation="MSAPAGSSHPAASARIPPKFGGAAVSGAAAPAGPGAGPAPHQQN
GPAQNQMQVPSGYGLHHQNYIAPSGHYSQGPGKMTSLPLDTQCGDYYSALYTVPTQNV
TPNTVNQQPGAQQLYSRGPPAPHIVGSTLGSFQGAASSASHLHTSASQPYSSFVNHYN
SPAMYSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQMFTSQNAPT
VRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDNLIR
NHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVLSGSSGSSSTRTPPTAN
HPVEPVTSVTQPSELLQQKGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSPAP
DPAPEPDPASAPAPASAPAPVVPQPSKMAKPFGYGYPTLQPGYQNATAPLISGVQPSN
PVYSGFQQYPQQYPGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNILPMTPVWAPV
PNLNADLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNT
IVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQN
STVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTR
IGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNA
LPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRS
STKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYY
PSFHYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLL
SLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLA
DVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSAL
MAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYR
IDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIE
DVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAE
FFQHLIEDRTEAAFSYYEFLLHVQQQICK"
BASE COUNT 1050 a 983 c 763 g 1077 t
ORIGIN
1 ggcgcgttcc ttcctcttcc tctctcctct ccggccccgc cttcccttcc ctccgcccac
61 ctccctgaag cggagccgcc gtcgccacca gcgccgtcat gtcggccccc gccgggtcct
121 ctcacccggc cgccagcgcc cggatcccgc ccaagttcgg cggagcggcc gtctcaggag
181 ccgcagcgcc cgcgggcccg ggtgcgggcc cggcgccgca ccagcagaac ggtccagccc
241 agaatcaaat gcaggttcca tctggatatg gattgcatca tcaaaactat attgctccct
301 caggacatta ctctcaagga cctgggaaaa tgacctcatt gccattggat acccagtgtg
361 gtgattacta ctctgctctc tatacagtac caacacaaaa tgtgactcct aacacagtga
421 accagcaacc aggagcacag cagttgtaca gcaggggtcc tcctgcccct catattgtgg
481 gatccactct aggatctttc caaggtgctg catcgtcagc atcccatttg catacgagtg
541 cctcccaacc atactcctct tttgtgaatc actacaatag tccagccatg tactctgcca
601 gctcttctgt tgcgtctcag ggatttccct ctacttgtgg tcattatgct atgtcaactg
661 tttctaatgc cgcgtatcct agtgtttcat atccctctct gcctgctggt gatacatatg
721 ggcaaatgtt tacctcacag aatgctccga ctgttaggcc agttaaagat aattcattct
781 ctggtcaaaa tacagctatc agccatccat cgccacttcc acctctacca tcacaacagc
841 accaccagca gcaaagtctt tcaggataca gtactctaac gtggtcatct ccaggccttc
901 catcgactca agacaatctc atccgaaacc acacaggatc cctggctgta gcgaacaaca
961 acccaaccat tactgttgca gattctttat cctgtcctgt tatgcaaaat gttcagcctc
1021 ccaagtccag cccagtggta tccactgttt tatcaggatc ctcaggatcc tcatcaacaa
1081 gaacacctcc cactgcaaat cacccagttg agcctgtgac ctcagttaca cagccatcag
1141 agctattaca acaaaaaggt gttgacagct cttctaccac aagcagtgct tctccaatgc
1201 ccaacagtta tgatgccctg gaaggaggca gttacccaga tatgctttct tcatcagcaa
1261 gcagtcctgc tcctgatccc gcccctgaac ctgatcctgc ttctgctcca gctccagctt
1321 cagctccagc tcctgtcgtc cctcagcctt caaaaatggc taagcctttt ggctatggct
1381 atccaacact tcagcctggt tatcagaatg ctacagcacc acttatttct ggagtacagc
1441 ccagtaaccc ggtatattct ggattccagc agtatcctca acagtatcct ggtgtgaacc
1501 agctatcctc cagtatagga ggattgagtc ttcagagttc tccacaacca gaaagcctga
1561 gacctgtaaa ccttactcag gagaggaata ttttacctat gactcctgtt tgggctcctg
1621 tacctaactt gaatgcagac ctcaaaaaat taaactgtag cccagattca tttcggtgta
1681 ctttgacaaa tattccacag acacaggctt tactgaataa agctaagctt cctttaggat
1741 tgttgttaca tcccttcaga gacctaacgc aattaccagt gataacatca aataccattg
1801 tgaggtgccg atcctgtcga acgtatatta acccctttgt atccttcatt gatcaacgta
1861 gatggaaatg caatttgtgc tatagagtaa acgatgttcc tgaagaattt atgtataacc
1921 cccttacccg atcttatgga gagcctcata aacgaccaga agttcagaat tcaactgtgg
1981 agttcattgc ttcttcagat tacatgctgc gtcctcctca acctgcagtt tacttgtttg
2041 ttttagatgt gtctcataat gcagtggaag ctggatattt gacaattttg tgccagtcac
2101 tcctagaaaa tctagacaag cttcctggag attcacgaac aagaatagga ttcatgacct
2161 ttgatagcac tattcatttc tacaatttac aagaaggatt atcacagcct caaatgttga
2221 ttgtgtctga tatagatgat gtttttctac ctacaccgga tagtttactt gtgaatctat
2281 atgaaagtaa agagcttata aaagacttac tgaatgcatt accaaacatg ttcaccaata
2341 caagagaaac acacagtgcc cttggtcctg cacttcaggc tgcctttaaa ttaatgtctc
2401 caacaggtgg ccgtgtgtct gtatttcaga cacagttacc ttccttgggt gcaggacttc
2461 tgcaatccag agaagatcct aatcagagat caagtacaaa ggtggtacaa catcttggcc
2521 ctgcaactga tttttataag aaacttgcat tagattgctc gggacagcaa actgcagtgg
2581 atttgttcct tttaagttca cagtattctg atcttgcttc tctagcttgc atgtccaagt
2641 attctgcagg gtgcatctat tattatccat cattccacta tactcacaat ccttcacaag
2701 cagaaaagtt acaaaaagac ctaaaacggt atctcacaag aaaaattggg tttgaagctg
2761 ttatgagaat aaggtgtact aaaggtcttt caatgcacac ttttcacggt aacttctttg
2821 tccgttctac tgatttgtta tcccttgcca acatcaatcc tgatgctgga tttgcggtgc
2881 agttgtcaat tgaagaaagt ttaacagata cttccttagt atgttttcaa acagccctat
2941 tatatacatc aagcaaaggt gagcggagaa ttagagtaca tacactttgt ttgccagtgg
3001 taagttcact agcagatgta tatgcgggag tggatgtaca agctgccatc tgccttctgg
3061 caaacatggc tgtggatcgg tccgtttcat caagtctgtc agatgcaaga gatgccttag
3121 tgaatgctgt agtggactca ttgtctgcat atggctcaac tgtctcaaat ttacagcact
3181 ctgcattgat ggcgcccagc tccctcaagt tgtttcctct ctatgttttg gcccttctca
3241 aacagaaagc atttagaacg ggtacaagca cacggctgga tgatcgtgta tatgccatgt
3301 gtcagataaa gtctcagcca cttgttcatc taatgaaaat gattcatccc aacttataca
3361 ggatagacag attgacagat gagggtgcag tacatgttaa tgacaggatt gtaccacagc
3421 cacctcttca aaaattgtct gcagagaagc tgacaagaga aggtgctttc cttatggact
3481 gtggctctgt tttttacatt tgggttggga aaggctgtga caataacttc atagaggatg
3541 tgcttggata tactaatttt gcatcaatac cacagaaaat gacacatctt ccagagctag
3601 atacactttc atcagaaaga gccagatcct tcataacttg gcttagagac agcagaccat
3661 taagtccaat ccttcacata gtaaaagatg agagtcctgc caaagcagaa ttttttcagc
3721 atttgattga agaccggaca gaggctgcat tttcttacta tgaatttttg cttcatgttc
3781 agcagcagat ttgtaagtga agtagaataa aattgaataa gaaaaagatc tataacctag
3841 gtaaagcata atctgtcaga gaagcgcgtg aga
//