LOCUS BC143271 4441 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens neogenin homolog 1 (chicken), mRNA (cDNA clone
MGC:176790 IMAGE:9051773), complete cds.
ACCESSION BC143271
VERSION BC143271.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: K Column: 7.
FEATURES Location/Qualifiers
source 1..4441
/db_xref="H-InvDB:HIT000501731"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176790 IMAGE:9051773"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCTATACC"
gene 1..4441
/gene="NEO1"
/gene_synonym="HsT17534"
/gene_synonym="NGN"
/db_xref="GeneID:4756"
/db_xref="HGNC:HGNC:7754"
/db_xref="MIM:601907"
CDS 67..4419
/gene="NEO1"
/gene_synonym="HsT17534"
/gene_synonym="NGN"
/codon_start=1
/product="NEO1 protein"
/protein_id="AAI43272.1"
/db_xref="GeneID:4756"
/db_xref="HGNC:HGNC:7754"
/db_xref="MIM:601907"
/translation="MAAERGARRLLSTPSFWLYCLLLLGRRAPGAAAARSGSAPQSPG
ASIRTFTPFYFLVEPVDTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQ
LLPDGSLFISNVVHSKHNKPDEGYYQCVATVESLGTIISRTAKLIVAGLPRFTSQPEP
SSVYAGNNAILNCEVNADLVPFVRWEQNRQPLLLDDRVIKLPSGMLVISNATEGDGGL
YRCVVESGGPPKYSDEVELKVLPDPEVISDLVFLKQPSPLVRVIGQDVVLPCVASGLP
TPTIKWMKNEEALDTESSERLVLLAGGSLEISDVTEDDAGTYFCIADNGNETIEAQAE
LTVQAQPEFLKQPTNIYAHESMDIVFECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKE
HNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLIILEHAPATTGPLPSAPRDVVASLV
STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATV
YIFRVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGN
GEIQNYKLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDV
AVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDV
TETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPE
VPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIEN
LDPSSHYVITLKAFNNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMP
PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLS
YLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKT
IIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYF
KIQARNSKGMGPMSEAVQFRTPKASGSGGKGSRLPDLGSDYKPPMSGSNSPHGSPTSP
LDSNMLLVIIVSVGVITIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKD
VKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSY
RGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASP
ARSHLYHPGSPWPIGTSMSLSDRANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGAT
SSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPTYDPALPSTPLLSQQA
LNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAH
LEGLMKDLNAITTA"
BASE COUNT 1222 a 1130 c 1032 g 1057 t
ORIGIN
1 gggagggaag gaggcaaggg ctccgcggcg ctgtcgccgc cgctgccgct cactctcggg
61 gaagagatgg cggcggagcg gggagcccgg cgactcctca gcaccccctc cttctggctc
121 tactgcctgc tgctgctcgg gcgccgggcg ccgggcgccg cggccgccag gagcggctcc
181 gcgccgcagt ccccaggagc cagcattcga acgttcactc cattttattt tctggtggag
241 ccggtggata cactctcagt tagaggctct tctgttatat taaactgttc agcatattct
301 gagccttctc caaaaattga atggaaaaaa gatggaactt ttttaaactt agtatcagat
361 gatcgacgcc agcttctccc ggatggatct ttatttatca gcaatgtggt gcattccaaa
421 cacaataaac ctgatgaagg ttattatcag tgtgtggcca ctgttgagag tcttggaact
481 attatcagta gaacagcgaa gctcatagta gcaggtcttc caagatttac cagccaacca
541 gaaccttcct cagtttatgc tgggaacaat gcaattctga attgtgaagt taatgcagat
601 ttggtcccat ttgtgaggtg ggaacagaac agacaacccc ttcttctgga tgatagagtt
661 atcaaacttc caagtggaat gctggttatc agcaatgcaa ctgaaggaga tggcgggctt
721 tatcgctgcg tagtggaaag tggtgggcca ccaaagtata gtgatgaagt tgaattgaag
781 gttcttccag atcctgaggt gatatcagac ttggtatttt tgaaacagcc ttctccctta
841 gtcagagtca ttggtcagga tgtagtgttg ccatgtgttg cttcaggact tcctactcca
901 accattaaat ggatgaaaaa tgaggaggca cttgacacag aaagctctga aagattggta
961 ttgctggcag gtggtagcct ggagatcagt gatgttactg aggatgatgc tgggacttat
1021 ttttgtatag ctgataatgg aaatgagaca attgaagctc aagcagagct tacagtgcaa
1081 gctcaacctg aattcctgaa gcagcctact aatatatatg ctcacgaatc tatggatatt
1141 gtatttgaat gtgaagtgac tggaaaacca actccaactg tgaagtgggt caaaaatggg
1201 gatatggtta tcccaagtga ttattttaag attgtaaagg aacataatct tcaagttttg
1261 ggtctggtga aatcagatga agggttctat cagtgcattg ctgaaaatga tgttggaaat
1321 gcacaagctg gagcccaact gataatcctt gaacatgcac cagccacaac gggaccactg
1381 ccttcagctc ctcgggatgt cgtggcctcc ctggtctcta cccgcttcat caaattgacg
1441 tggcggacac ctgcatcaga tcctcacgga gacaacctta cctactctgt gttctacacc
1501 aaggaaggga ttgctaggga acgtgttgag aataccagtc acccaggaga gatgcaagta
1561 accattcaaa acctaatgcc agcgaccgtg tacatcttta gagttatggc tcaaaataag
1621 catggctcag gagagagttc agctccactg cgagtagaaa cacaacctga ggttcagctc
1681 cctggcccag cacctaacct tcgtgcatat gcagcttcgc ctacctccat cactgttacg
1741 tgggaaacac cagtgtctgg caatggggaa attcagaatt ataaattgta ctacatggaa
1801 aaggggactg ataaagaaca ggatgttgat gtttcaagtc actcttacac cattaatggg
1861 ttgaaaaaat atacagagta tagtttccga gtggtggcct acaataaaca tggtcctgga
1921 gtttccacac cagatgttgc tgttcgaaca ttgtcagatg ttcccagtgc tgctcctcag
1981 aatctgtcct tggaagtgag aaattcaaag agtattatga ttcactggca gccacctgct
2041 ccagccacac aaaatgggca gattactggc tacaagattc gctaccgaaa ggcctcccga
2101 aagagtgatg tcactgagac cttggtaagc gggacacagc tgtctcagct gattgaaggt
2161 cttgatcggg ggactgagta taatttccga gtggctgctc taacaatcaa tggtacaggc
2221 ccggcaactg actggctgtc tgctgaaact tttgaaagtg acctagatga aactcgtgtt
2281 cctgaagtgc ctagctctct tcacgtacgc ccgctcgtta ctagcatcgt agtgagctgg
2341 actcctccag agaatcagaa cattgtggtc agaggttacg ccattggtta tggcattggc
2401 agccctcatg cccagaccat caaagtggac tataaacagc gctattacac cattgaaaat
2461 ctggatccca gctctcacta tgtgattacc ctgaaagcat ttaataacgt gggtgaaggc
2521 atccccctgt atgagagtgc tgtgaccagg cctcacacag acacttctga agttgattta
2581 tttgttatta atgctccata cactccagtg ccagatccca ctcccatgat gccaccagtg
2641 ggagttcagg cttccattct gagtcatgac accatcagga ttacgtgggc agacaactcg
2701 ctgcccaagc accagaagat tacagactcc cgatactaca ccgtccgatg gaaaaccaac
2761 atcccagcaa acaccaagta caagaatgca aatgcaacca ctttgagtta tttggtgact
2821 ggtttaaagc cgaatacact ctatgaattc tctgtgatgg tgaccaaagg tcgaagatca
2881 agtacatgga gtatgacagc ccatgggacc acctttgaat tagttccgac ttctccaccc
2941 aaggatgtga ctgttgtgag taaagagggg aaacctaaga ccataattgt gaattggcag
3001 cctccctccg aagccaatgg caaaattaca ggttacatca tatattacag tacagatgtg
3061 aatgcagaga tacatgactg ggttattgag cctgttgtgg gaaacagact gactcaccag
3121 atacaagagt taactcttga cacaccatac tacttcaaaa tccaggcacg gaactcaaag
3181 ggcatgggac ccatgtctga agctgtccaa ttcagaacac ctaaagcctc agggtctgga
3241 gggaaaggaa gccggctgcc agacctagga tccgactaca aacctccaat gagcggcagt
3301 aacagccctc atgggagccc cacctctcct ctggacagta atatgctgct ggtcataatt
3361 gtttctgttg gcgtcatcac catcgtggtg gttgtgatta tcgctgtctt ttgtacccgt
3421 cgtaccacct ctcaccagaa aaagaaacga gctgcctgca aatcagtgaa tggctctcat
3481 aagtacaaag ggaattccaa agatgtgaaa cctccagatc tctggatcca tcatgagaga
3541 ctggagctga aacccattga taagtctcca gacccaaacc ccatcatgac tgatactcca
3601 attcctcgca actctcaaga tatcacacca gttgacaact ccatggacag caatatccat
3661 caaaggcgaa attcatacag agggcatgag tcagaggaca gcatgtctac actggctgga
3721 aggcgaggaa tgagaccaaa aatgatgatg ccctttgact cccagccacc ccagcctgtg
3781 attagtgccc atcccatcca ttccctcgat aaccctcacc atcatttcca ctccagcagc
3841 ctcgcttctc cagctcgcag tcatctctac cacccgggca gcccatggcc cattggcaca
3901 tccatgtccc tttcagacag ggccaattcc acagaatccg ttcgaaatac ccccagcact
3961 gacaccatgc cagcctcttc gtctcaaaca tgctgcactg atcaccagga ccctgaaggt
4021 gctaccagct cctcttactt ggccagctcc caagaggaag attcaggcca gagtcttccc
4081 actgcccatg ttcgcccttc ccacccattg aagagcttcg ccgtgccagc aatcccgcct
4141 ccaggacctc ccacctatga tcctgcattg ccaagcacac cattactgtc ccagcaagct
4201 ctgaaccatc acattcactc agtgaagaca gcctccatcg ggactctagg aaggagccgg
4261 cctcctatgc cagtggttgt tcccagtgcc cctgaagtgc aggagaccac aaggatgttg
4321 gaagactccg agagtagcta tgaaccagat gagctgacca aagagatggc ccacctggaa
4381 ggactaatga aggacctaaa cgctatcaca acagcatgac gaccttcacc aggacctgac
4441 t
//