LOCUS BC143268 4068 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens SEC24 family, member B (S. cerevisiae), mRNA (cDNA
clone MGC:176787 IMAGE:9051770), complete cds.
ACCESSION BC143268
VERSION BC143268.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4068)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4068)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: K Column: 1.
FEATURES Location/Qualifiers
source 1..4068
/db_xref="H-InvDB:HIT000501728"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176787 IMAGE:9051770"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATATCGT"
gene 1..4068
/gene="SEC24B"
/gene_synonym="SEC24"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
CDS 99..3995
/gene="SEC24B"
/gene_synonym="SEC24"
/codon_start=1
/product="SEC24B protein"
/protein_id="AAI43269.1"
/db_xref="GeneID:10427"
/db_xref="HGNC:HGNC:10704"
/db_xref="MIM:607184"
/translation="MSAPAGSSHPAASARIPPKFGGAAVSGAAAPAGPGAGPAPHQQN
ETGFHHVAQASLELLDPSNLPASASQIAGSTGPAQNQMQVPSGYGLHHQNYIAPSGHY
SQGPGKMTSLPLDTQCGDYYSALYTVPTQNVTPNTVNQQPGAQQLYSRGPPAPHIVGS
TLGSFQGAASSASHLHTSASQPYSSFVNHYNSPAMYSASSSVASQGFPSTCGHYAMST
VSNAAYPSVSYPSLPAGDTYGQMFTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPS
QQHHQQQSLSGYSTLTWSSPGLPSTQDNLIRNHTGSLAVANNNPTITVADSLSCPVMQ
NVQPPKSSPVVSTVLSGSSGSSSTRTPPTANHPVEPVTSVTQPSELLQQKGVQYGEYV
NNQASSAPTPLSSTSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLS
SSASSPAPDPAPEPDPASAPAPASAPAPVVPQPSKMAKPFGYGYPTLQPGYQNATAPL
ISGVQPSNPVYSGFQQYPQYPGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNILPM
TPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQL
PVITSNTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPH
KRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKL
PGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKEL
IKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSR
EDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYS
AGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFF
VRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCL
PVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVS
NLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKM
IHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKG
CDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKD
ESPAKAEFFQHLIEDRTEAAFSYYEFLLHVQQQICK"
BASE COUNT 1103 a 1033 c 814 g 1118 t
ORIGIN
1 ggcgcgttcc ttcctcttcc tctctcctct ccggccccgc cttcccttcc ctccgcccac
61 ctccctgaag cggagccgcc gtcgccacca gcgccgtcat gtcggccccc gccgggtcct
121 ctcacccggc cgccagcgcc cggatcccgc ccaagttcgg cggagcggcc gtctcaggag
181 ccgcagcgcc cgcgggcccg ggtgcgggcc cggcgccgca ccagcagaac gagacgggat
241 ttcaccatgt tgcccaagct agtcttgaac tcctggaccc aagcaatctg cccgcctcgg
301 cctcccaaat tgctgggagt acaggtccag cccagaatca aatgcaggtt ccatctggat
361 atggattgca tcatcaaaac tatattgctc cctcaggaca ttactctcaa ggacctggga
421 aaatgacctc attgccattg gatacccagt gtggtgatta ctactctgct ctctatacag
481 taccaacaca aaatgtgact cctaacacag tgaaccagca accaggagca cagcagttgt
541 acagcagggg tcctcctgcc cctcatattg tgggatccac tctaggatct ttccaaggtg
601 ctgcatcgtc agcatcccat ttgcatacga gtgcctccca accatactcc tcttttgtga
661 atcactacaa tagtccagcc atgtactctg ccagctcttc tgttgcgtct cagggatttc
721 cctctacttg tggtcattat gctatgtcaa ctgtttctaa tgccgcgtat cctagtgttt
781 catatccctc tctgcctgct ggtgatacat atgggcaaat gtttacctca cagaatgctc
841 cgactgttag gccagttaaa gataattcat tctctggtca aaatacagct atcagccatc
901 catcgccact tccacctcta ccatcacaac agcaccacca gcagcaaagt ctttcaggat
961 acagtactct aacgtggtca tctccaggcc ttccatcgac tcaagacaat ctcatccgaa
1021 accacacagg atccctggct gtagcgaaca acaacccaac cattactgtt gcagattctt
1081 tatcctgtcc tgttatgcaa aatgttcagc ctcccaagtc cagcccagtg gtatccactg
1141 ttttatcagg atcctcagga tcctcatcaa caagaacacc tcccactgca aatcacccag
1201 ttgagcctgt gacctcagtt acacagccat cagagctatt acaacaaaaa ggcgtgcagt
1261 atggtgaata tgttaataac caagctagct ccgcaccaac tcccttgtca tcaacttccg
1321 atgatgagga agaggaggag gaggatgagg aagcaggtgt tgacagctct tctaccacaa
1381 gcagtgcttc tccaatgccc aacagttatg atgccctgga aggaggcagt tacccagata
1441 tgctttcttc atcagcaagc agtcctgctc ctgatcccgc ccctgaacct gatcctgctt
1501 ctgctccagc tccagcttca gctccagctc ctgtcgtccc tcagccttca aaaatggcta
1561 agccttttgg ctatggctat ccaacacttc agcctggtta tcagaatgct acagcaccac
1621 ttatttctgg agtacagccc agtaacccgg tatattctgg attccagcag tatcctcaat
1681 atcctggtgt gaaccagcta tcctccagta taggaggatt gagtcttcag agttctccac
1741 aaccagaaag cctgagacct gtaaacctta ctcaggagag gaatatttta cctatgactc
1801 ctgtttgggc tcctgtacct aacttgaatg cagacctcaa aaaattaaac tgtagcccag
1861 attcatttcg gtgtactttg acaaatattc cacagacaca ggctttactg aataaagcta
1921 agcttccttt aggattgttg ttacatccct tcagagacct aacgcaatta ccagtgataa
1981 catcaaatac cattgtgagg tgccgatcct gtcgaacgta tattaacccc tttgtatcct
2041 tcattgatca acgtagatgg aaatgcaatt tgtgctatag agtaaacgat gttcctgaag
2101 aatttatgta taaccccctt acccgatctt atggagagcc tcataaacga ccagaagttc
2161 agaattcaac tgtggagttc attgcttctt cagattacat gctgcgtcct cctcaacctg
2221 cagtttactt gtttgtttta gatgtgtctc ataatgcagt ggaagctgga tatttgacaa
2281 ttttgtgcca gtcactccta gaaaatctag acaagcttcc tggagattca cgaacaagaa
2341 taggattcat gacctttgat agcactattc atttctacaa tttacaagaa ggattatcac
2401 agcctcaaat gttgattgtg tctgatatag atgatgtttt tctacctaca ccggatagtt
2461 tacttgtgaa tctatatgaa agtaaagagc ttataaaaga cttactgaat gcattaccaa
2521 acatgttcac caatacaaga gaaacacaca gtgcccttgg tcctgcactt caggctgcct
2581 ttaaattaat gtctccaaca ggtggccgtg tgtctgtatt tcagacacag ttaccttcct
2641 tgggtgcagg acttctgcaa tccagagaag atcctaatca gagatcaagt acaaaggtgg
2701 tacaacatct tggccctgca actgattttt ataagaaact tgcattagat tgctcgggac
2761 agcaaactgc agtggatttg ttccttttaa gttcacagta ttctgatctt gcttctctag
2821 cttgcatgtc caagtattct gcagggtgca tctattatta tccatcattc cactatactc
2881 acaatccttc acaagcagaa aagttacaaa aagacctaaa acggtatctc acaagaaaaa
2941 ttgggtttga agctgttatg agaataaggt gtactaaagg tctttcaatg cacacttttc
3001 acggtaactt ctttgtccgt tctactgatt tgttatccct tgccaacatc aatcctgatg
3061 ctggatttgc ggtgcagttg tcaattgaag aaagtttaac agatacttcc ttagtatgtt
3121 ttcaaacagc cctattatat acatcaagca aaggtgagcg gagaattaga gtacatacac
3181 tttgtttgcc agtggtaagt tcactagcag atgtatatgc gggagtggat gtacaagctg
3241 ccatctgcct tctggcaaac atggctgtgg atcggtccgt ttcatcaagt ctgtcagatg
3301 caagagatgc cttagtgaat gctgtagtgg actcattgtc tgcatatggc tcaactgtct
3361 caaatttaca gcactctgca ttgatggcgc ccagctccct caagttgttt cctctctatg
3421 ttttggccct tctcaaacag aaagcattta gaacgggtac aagcacacgg ctggatgatc
3481 gtgtatatgc catgtgtcag ataaagtctc agccacttgt tcatctaatg aaaatgattc
3541 atcccaactt atacaggata gacagattga cagatgaggg tgcagtacat gttaatgaca
3601 ggattgtacc acagccacct cttcaaaaat tgtctgcaga gaagctgaca agagaaggtg
3661 ctttccttat ggactgtggc tctgtttttt acatttgggt tgggaaaggc tgtgacaata
3721 acttcataga ggatgtgctt ggatatacta attttgcatc aataccacag aaaatgacac
3781 atcttccaga gctagataca ctttcatcag aaagagccag atccttcata acttggctta
3841 gagacagcag accattaagt ccaatccttc acatagtaaa agatgagagt cctgccaaag
3901 cagaattttt tcagcatttg attgaagacc ggacagaggc tgcattttct tactatgaat
3961 ttttgcttca tgttcagcag cagatttgta agtgaagtag aataaaattg aataagaaaa
4021 agatctataa cctaggtaaa gcataatctg tcagagaagc gcgtgaaa
//