LOCUS BC143245 1564 bp mRNA linear HUM 02-JAN-2009
DEFINITION Homo sapiens microtubule-associated protein 2, mRNA (cDNA clone
IMAGE:9051746), complete cds.
ACCESSION BC143245
VERSION BC143245.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1564)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1564)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: E Column: 1
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1564
/db_xref="H-InvDB:HIT000501705"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9051746"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GCAACGAC"
gene 1..1564
/gene="MAP2"
/gene_synonym="MAP2A"
/gene_synonym="MAP2B"
/gene_synonym="MAP2C"
/db_xref="GeneID:4133"
/db_xref="HGNC:HGNC:6839"
/db_xref="MIM:157130"
CDS 83..1498
/gene="MAP2"
/gene_synonym="MAP2A"
/gene_synonym="MAP2B"
/gene_synonym="MAP2C"
/codon_start=1
/product="microtubule-associated protein 2"
/protein_id="AAI43246.1"
/db_xref="GeneID:4133"
/db_xref="HGNC:HGNC:6839"
/db_xref="MIM:157130"
/translation="MADERKDEAKAPHWTSAPLTEASAHSHPPEIKDQGGAGEGLVRS
ANGFPYREDEEGAFGEHGSQGTYSNTKENGINGELTSADRETAEEVSARIVQVVTAEA
VAVLKGEQEKEAQHKDQTAALPLAAEETANLPPSPPPSPASEQTVTVEEAAGGESALA
PSVFKQAKDKVSDGVTKSPEKRSSLPRPSSILPPRRGVSGDRDENSFSLNSSISSSAR
RTTRSEPIRRAGKSGTSTPTTPGSTAITPGTPPSYSSRTPGTPGTPSYPRTPHTPGTP
KSAILVPSEKKVAIIRTPPKSPATPKQLRLINQPLPDLKNVKSKIGSTDNIKYQPKGG
QVQIVTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHH
VPGGGNVKIDSQKLNFREHAKARVDHGAEIITQSPGRSSVASPRRLSNVSSSGSINLL
ESPQLATLAEDVTAALAKQGL"
BASE COUNT 462 a 416 c 368 g 318 t
ORIGIN
1 ccctttgaga acacgacaca acgaacttta tattttacca cttccttgaa tagttgcagg
61 agaaataaca aggcattgaa gaatggcaga tgaacggaaa gatgaagcaa aggcacctca
121 ctggacctca gcaccgctaa cagaggcatc tgcacactca catccacctg agattaagga
181 tcaaggcgga gcaggggaag gacttgtccg aagcgccaat ggattcccat acagggagga
241 tgaagagggt gcctttggag agcatgggtc acagggcacc tattcaaata ccaaagagaa
301 tgggatcaac ggagagctga cctcagctga cagagaaaca gcagaggagg tgtctgcaag
361 gatagttcaa gtagtcactg ctgaggctgt agcagtcctg aaaggtgaac aagagaaaga
421 agctcaacat aaagaccaga ctgcagctct gcctttagca gctgaagaaa cagctaatct
481 gcctccttct ccacccccat cacctgcctc agaacagact gtcacagtgg aggaagcagc
541 aggtggggaa tcagctctgg ctcccagtgt atttaaacag gcaaaggaca aagtctctga
601 cggagtaacc aagagcccag aaaagcgctc ttctctccca agaccttcct ccattctccc
661 tcctcggcga ggtgtgtcag gagacagaga tgagaattcc ttctctctca acagttctat
721 ctcttcttca gcacggcgga ccaccaggtc agagccaatt cgcagagcag ggaagagtgg
781 tacctcaaca cccactaccc ctgggtctac tgccatcact cctggcaccc caccaagtta
841 ttcttcacgc acaccaggca ctcctggaac ccctagctat cccaggaccc ctcacacacc
901 aggaaccccc aagtctgcca tcttggtgcc gagtgagaag aaggtcgcca tcatacgtac
961 tcctccaaaa tctcctgcga ctcccaagca gcttcggctt attaaccaac cactgccaga
1021 cctgaagaat gtcaaatcca aaatcggatc aacagacaac atcaaatacc agcctaaagg
1081 ggggcaggta caaattgtta ccaagaaaat agacctaagc catgtgacat ccaaatgtgg
1141 ctctctgaag aacatccgcc acaggccagg tggcggacgt gtgaaaattg agagtgtaaa
1201 actagatttc aaagaaaagg cccaagctaa agttggttct cttgataatg ctcatcatgt
1261 acctggaggt ggtaatgtca agattgacag ccaaaagttg aacttcagag agcatgctaa
1321 agcccgtgtg gaccatgggg ctgagatcat tacacagtcc ccaggcagat ccagcgtggc
1381 atcaccccga cgactcagca atgtctcctc gtctggaagc atcaacctgc tcgaatctcc
1441 tcagcttgcc actttggctg aggatgtcac tgctgcactc gctaagcagg gcttgtgaat
1501 atttctcatt tagcattgaa ataataatat ttaggcatga gctcttggca ggagtgggct
1561 ctga
//