LOCUS BC143039 1564 bp mRNA linear HUM 13-JUN-2007 DEFINITION Homo sapiens apolipoprotein L, 1, mRNA (cDNA clone MGC:165229 IMAGE:40034506), complete cds. ACCESSION BC143039 VERSION BC143039.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1564) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1564) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 33 Row: a Column: 14. FEATURES Location/Qualifiers source 1..1564 /db_xref="H-InvDB:HIT000435495" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:165229 IMAGE:40034506" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GTCATCCT sequenced from the reverse primer" gene 1..1564 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" CDS 99..1295 /gene="APOL1" /gene_synonym="APO-L" /gene_synonym="APOL-I" /codon_start=1 /product="APOL1 protein" /protein_id="AAI43040.1" /db_xref="GeneID:8542" /db_xref="HGNC:HGNC:618" /db_xref="MIM:603743" /translation="MEGAALLRVSVLCIWMSALFLGVGVRAEEAGARVQQNVPSGTDT GDPQSKPLGDWAAGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAE LPRNEADELRKALDNLARQMIMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRA LADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITA ALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLGENISNFLSLAGNTYQLT RGIGKDIRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVK LTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKIL QADQEL" BASE COUNT 455 a 357 c 439 g 313 t ORIGIN 1 gacgcataac tggaggtggg atccacacag ctcagaacag ctggatcttg ctcagtctct 61 gccaggggaa gattccttgg aggaggccct gcagcgacat ggagggagct gctttgctga 121 gagtctctgt cctctgcatc tggatgagtg cacttttcct tggtgtggga gtgagggcag 181 aggaagctgg agcgagggtg caacaaaacg ttccaagtgg gacagatact ggagatcctc 241 aaagtaagcc cctcggtgac tgggctgctg gcaccatgga cccagagagc agtatcttta 301 ttgaggatgc cattaagtat ttcaaggaaa aagtgagcac acagaatctg ctactcctgc 361 tgactgataa tgaggcctgg aacggattcg tggctgctgc tgaactgccc aggaatgagg 421 cagatgagct ccgtaaagct ctggacaacc ttgcaagaca aatgatcatg aaagacaaaa 481 actggcacga taaaggccag cagtacagaa actggtttct gaaagagttt cctcggttga 541 aaagtgagct tgaggataac ataagaaggc tccgtgccct tgcagatggg gttcagaagg 601 tccacaaagg caccaccatc gccaatgtgg tgtctggctc tctcagcatt tcctctggca 661 tcctgaccct cgtcggcatg ggtctggcac ccttcacaga gggaggcagc cttgtactct 721 tggaacctgg gatggagttg ggaatcacag ccgctttgac cgggattacc agcagtacca 781 tggactacgg aaagaagtgg tggacacaag cccaagccca cgacctggtc atcaaaagcc 841 ttgacaaatt gaaggaggtg agggagtttt tgggtgagaa catatccaac tttctttcct 901 tagctggcaa tacttaccaa ctcacacgag gcattgggaa ggacatccgt gccctcagac 961 gagccagagc caatcttcag tcagtaccgc atgcctcagc ctcacgcccc cgggtcactg 1021 agccaatctc agctgaaagc ggtgaacagg tggagagggt taatgaaccc agcatcctgg 1081 aaatgagcag aggagtcaag ctcacggatg tggcccctgt aagcttcttt cttgtgctgg 1141 atgtagtcta cctcgtgtac gaatcaaagc acttacatga gggggcaaag tcagagacag 1201 ctgaggagct gaagaaggtg gctcaggagc tggaggagaa gctaaacatt ctcaacaata 1261 attataagat tctgcaggcg gaccaagaac tgtgaccaca gggcagggca gccaccagga 1321 gagatatgcc tggcaggggc caggacaaaa tgcaaacttt tttttttttc cgagactcca 1381 tctcaaaaaa aaaaaaaaaa aagaatatat tgacggaaga atagagagga ggcttgaagg 1441 aaccagcaat gagaaggcca ggaaaagaaa gagctgaaaa tggagaaagc ccaagagtta 1501 gaacagttgg atacaggaga agaaacagcg gctccactac agacccagcc ccaggttcaa 1561 tgtc //