LOCUS BC142983 1442 bp mRNA linear HUM 11-JUN-2007
DEFINITION Homo sapiens cathepsin L1, mRNA (cDNA clone MGC:167089
IMAGE:8860422), complete cds.
ACCESSION BC142983
VERSION BC142983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: RIKEN
cDNA Library Preparation: RIKEN
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 13 Row: c Column: 8.
FEATURES Location/Qualifiers
source 1..1442
/db_xref="H-InvDB:HIT000435477"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167089 IMAGE:8860422"
/tissue_type="Clones donated by RIKEN"
/clone_lib="NIH_MGC_424"
/lab_host="DH10B"
/note="Vector: pFLC1"
gene 1..1442
/gene="CTSL1"
/gene_synonym="CATL"
/gene_synonym="MEP"
/db_xref="GeneID:1514"
/db_xref="HGNC:HGNC:2537"
/db_xref="MIM:116880"
CDS 146..1147
/gene="CTSL1"
/gene_synonym="CATL"
/gene_synonym="MEP"
/codon_start=1
/product="cathepsin L1"
/protein_id="AAI42984.1"
/db_xref="GeneID:1514"
/db_xref="HGNC:HGNC:2537"
/db_xref="MIM:116880"
/translation="MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNE
EGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK
GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTGRLIS
LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYS
VANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDH
GVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV"
BASE COUNT 404 a 282 c 397 g 359 t
ORIGIN
1 agtaccgcga cctccgcaac cttgagcggc atccgtggag tgcgcctgcg cagctacgac
61 cgcagcagga aagcgccgcc ggccaggccc agctgtggcc ggacagggac tggaagagag
121 gacgcggtcg agtaggtttt aaaacatgaa tcctacactc atccttgctg ccttttgcct
181 gggaattgcc tcagctactc taacatttga tcacagttta gaggcacagt ggaccaagtg
241 gaaggcgatg cacaacagat tatacggcat gaatgaagaa ggatggagga gagcagtgtg
301 ggagaagaac atgaagatga ttgaactgca caatcaggaa tacagggaag ggaaacacag
361 cttcacaatg gccatgaacg cctttggaga catgaccagt gaagaattca ggcaggtgat
421 gaatggcttt caaaaccgta agcccaggaa ggggaaagtg ttccaggaac ctctgtttta
481 tgaggccccc agatctgtgg attggagaga gaaaggctac gtgactcctg tgaagaatca
541 gggtccgtgt ggttcttgtt gggcttttag tgctactggt gctcttgaag gacagatgtt
601 ccggaaaact gggaggctta tctcactgag tgagcagaat ctggtagact gctctgggcc
661 tcaaggcaat gaaggctgca atggtggcct aatggattat gctttccagt atgttcagga
721 taatggaggc ctggactctg aggaatccta tccatatgag gcaacagaag aatcctgtaa
781 gtacaatccc aagtattctg ttgctaatga caccggcttt gtggacatcc ctaagcagga
841 gaaggccctg atgaaggcag ttgcaactgt ggggcccatt tctgttgcta ttgatgcagg
901 tcatgagtcc ttcctgttct ataaagaagg catttatttt gagccagact gtagcagtga
961 agacatggat catggtgtgc tggtggttgg ctacggattt gaaagcacag aatcagataa
1021 caataaatat tggctggtga agaacagctg gggtgaagaa tggggcatgg gtggctacgt
1081 aaagatggcc aaagaccgga gaaaccattg tggaattgcc tcagcagcca gctaccccac
1141 tgtgtgagct ggtggacggt gatgaggaag gacttgactg gggatggcgc atgcatggga
1201 ggaattcatc ttcagtctac cagcccccgc tgtgtcggat acacactcga atcattgaag
1261 atccgagtgt gatttgaatt ctgtgatatt ttcacactgg taaatgttac ctctatttta
1321 attactgcta taaataggtt tatattattg attcacttac tgactttgca ttttcgtttt
1381 taaaaggatg tataaatttt tacctgttta aataaaattt aatttcgaaa aaaaaaaaaa
1441 aa
//