LOCUS BC142688 3846 bp mRNA linear HUM 11-JUN-2007
DEFINITION Homo sapiens elastin microfibril interfacer 1, mRNA (cDNA clone
MGC:165001 IMAGE:40148654), complete cds.
ACCESSION BC142688
VERSION BC142688.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3846)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3846)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: l Column: 4.
FEATURES Location/Qualifiers
source 1..3846
/db_xref="H-InvDB:HIT000435391"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:165001 IMAGE:40148654"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..3846
/gene="EMILIN1"
/gene_synonym="DKFZP586M121"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/db_xref="GeneID:11117"
/db_xref="HGNC:HGNC:19880"
/db_xref="MIM:130660"
CDS 382..3432
/gene="EMILIN1"
/gene_synonym="DKFZP586M121"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/codon_start=1
/product="elastin microfibril interfacer 1"
/protein_id="AAI42689.1"
/db_xref="GeneID:11117"
/db_xref="HGNC:HGNC:19880"
/db_xref="MIM:130660"
/translation="MAPRTLWSCYLCCLLTAAAGAASYPPRGFSLYTGSSGALSPGGP
QAQIAPRPASRHRNWCAYVVTRTVSCVLEDGVETYVKYQPCAWGQPQCPQSIMYRRFL
RPRYRVAYKTVTDMEWRCCQGYGGDDCAESPAPALGPASSTPRPLARPARPNLSGSSA
GSPLSGLGGEGPGESEKVQQLEEQVQSLTKELQGLRGVLQGLSGRLAEDVQRAVETAF
NGRQQPADAAARPGVHETLNEIQHQLQLLDTRVSTHDQELGHLNNHHGGSSSSGGSRA
PAPASAPPGPSEELLRQLEQRLQESCSVCLAGLDGFRRQQQEDRERLRAMEKLLASVE
ERQRHLAGLAVGRRPPQECCSPELGRRLAELERRLDVVAGSVTVLSGRRGTELGGAAG
QGGHPPGYTSLASRLSRLEDRFNSTLGPSEEQEESWPGAPGGLSHWLPAARGRLEQLG
GLLANVSGELGGRLDLLEEQVAGAMQACGQLCSGAPGEQDSQVSEILSALERRVLDSE
GQLRLVGSGLHTVEAAGEARQATLEGLQEVVGRLQDRVDAQDETAAEFTLRLNLTAAR
LGQLEGLLQAHGDEGCGACGGVQEELGRLRDGVERCSCPLLPPRGPGAGPGVGGPSRG
PLDGFSVFGGSSGSALQALQGELSEVILSFSSLNDSLNELQTTVEGQGADLADLGATK
DRIISEINRLQQEATEHATESEERFRGLEEGQAQAGQCPSLEGRLGRLEGVCERLDTV
AGGLQGLREGLSRHVAGLWAGLRETNTTSQMQAALLEKLVGGQAGLGRRLGALNSSLQ
LLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQG
EQGVEGAPAAPVPQVAFSAALSLPRSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGR
YLLSAVLTGHRHEKVEAVLSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFS
LILPLQAGDTVCVDLVMGQLAHSEEPLTIFSGALLYGDPELEHA"
BASE COUNT 701 a 1177 c 1406 g 562 t
ORIGIN
1 ggacagggag accagaagag ggccagctgg gacgaggggg cggacgccca ggaggcaact
61 tctgagacgc agctcctgag aggggcaggg accaggcgcg ggaggccaga gggggcacag
121 agaacaaacc ccctcagaag tgaagaggag agcggaagga accgagaggg gacggacagg
181 agctgaggag gaaagaggag gggagagggg tcaggccagg cagccaagga gaagacgtgt
241 ggccgggggc tatcagaagg aaactgggac ggacgggccg ggctcgggct gtcctgtgga
301 gcagcagcat ccccggggcc ggcagaggcg ccagtggctg ggcgggatga gtctctgagg
361 gccactgtgg agcgccccgc catggccccc cgcaccctct ggagctgcta cctctgctgc
421 ctgctgacgg cagctgcagg ggccgccagc taccctcctc gaggtttcag cctctacaca
481 ggttccagtg gggccctcag ccccgggggg ccccaggccc agattgcccc ccggccagcc
541 agccgccaca ggaactggtg tgcctacgtg gtgacccgga cagtgagctg tgtccttgag
601 gatggagtgg agacatatgt caagtaccag ccttgtgcct ggggccagcc ccagtgtccc
661 caaagcatca tgtaccgccg cttcctccgc cctcgctacc gtgtggccta caagacagtg
721 accgacatgg agtggaggtg ctgtcagggt tatgggggcg atgactgtgc tgagagtccc
781 gctccagcgc tggggcctgc gtcttccaca ccacggcccc tggcccggcc tgcccgcccc
841 aacctctctg gctccagtgc aggcagcccc ctcagtggac tggggggaga aggtcctggg
901 gagtcagaga aggtgcagca gctggaggaa caggtgcaga gcctgaccaa ggagctgcaa
961 ggcctgcggg gcgtcctgca aggactgagc gggcgcctgg cagaggatgt gcagagggct
1021 gtggagacgg ccttcaacgg gaggcagcag ccagctgacg cggctgcccg ccctggggtg
1081 catgaaaccc tcaatgagat ccagcaccag ctgcagctcc tggacacccg cgtctccacc
1141 cacgaccagg agctgggtca cctcaacaac catcatggcg gcagcagcag cagtgggggc
1201 agcagggccc cagccccagc ctcagcccct ccgggcccca gtgaggagct gctgcggcag
1261 ctggagcagc ggttgcagga gtcctgctcc gtgtgcctgg ccgggctaga tggcttccgc
1321 cggcagcagc aggaggacag ggagcggctg cgagcgatgg agaagctgct ggcctcggtg
1381 gaggagcggc aacggcacct cgcagggctg gcggtgggcc gcaggccccc tcaggaatgc
1441 tgctctccag agctgggccg gcgactggca gagctggagc gcaggctgga tgtcgtggcc
1501 ggctcagtga cagtgctgag tgggcggcga ggcacagagc tgggaggagc cgcggggcag
1561 ggaggccacc ccccaggcta caccagcttg gcctcccgcc tgtctcgcct ggaggaccgc
1621 ttcaactcca ccctgggccc ttcggaggag caggaggaga gctggcctgg ggctcctggg
1681 gggctgagcc actggctgcc tgctgcccgg ggccgactag agcagttggg ggggctgctg
1741 gccaatgtga gcggggagct gggggggcgg ttggatctgt tggaggagca ggtggcaggg
1801 gccatgcagg catgcgggca gctctgctct ggggcccctg gggagcagga ctctcaagtc
1861 agcgagatcc tcagtgcctt ggagcgcagg gtgctggaca gtgaggggca gctgcggctg
1921 gtgggctccg gcctgcacac ggtggaagca gcgggggagg cccggcaggc cacgctggag
1981 ggattacaag aggttgtggg ccggctccag gatcgtgtgg atgcccagga tgagacagct
2041 gcagagttca cactacggct gaatctcact gcggcccggc taggccaact ggaggggctg
2101 ctgcaggccc atggggatga gggctgtggg gcctgtggcg gagtccaaga ggaactaggc
2161 cgccttcggg atggtgtgga gcgctgctcc tgccccctgt tgcctcctcg gggtcctggg
2221 gctggtccag gtgttggggg cccaagccgt gggcccctgg acggcttcag cgtgtttggg
2281 ggcagctcag gctcagccct gcaggccctg caaggagagc tctctgaggt tattctcagc
2341 ttcagctccc tcaatgactc actgaatgag ctccagacca ctgtggaggg ccagggcgct
2401 gatctggctg acctgggggc aaccaaggac cgtatcattt ctgagattaa caggctgcag
2461 caggaggcca cagagcatgc tacagagagt gaagagcgct tccgaggcct agaggaggga
2521 caagcacagg ccggccagtg ccccagctta gaggggcgat tgggccgtct tgagggtgtc
2581 tgtgaacggt tggacactgt ggctggggga ctgcagggcc tgcgcgaggg cctttccaga
2641 cacgtggctg ggctctgggc tgggctccgg gaaaccaaca ccaccagcca gatgcaggca
2701 gccctgctgg agaagctggt cgggggacag gcgggcctgg gcaggcggct gggtgccctt
2761 aacagctccc tgcagctcct ggaggaccgt ctgcaccagc tcagcctgaa ggacctcact
2821 gggcctgcag gagaggctgg gcccccaggg cctcctgggc tgcagggacc cccaggccct
2881 gctggacctc caggatcacc aggcaaggac gggcaagagg gccccatcgg gccaccaggt
2941 cctcaaggtg aacagggagt ggagggggca ccagcagccc ctgtgcccca agtggcattt
3001 tcagctgctc tgagtttgcc ccggtctgaa ccaggcacgg tccccttcga cagagtcctg
3061 ctcaatgatg gaggctatta tgatccagag acaggcgtgt tcacagcgcc actggctgga
3121 cgctacttgc tgagcgcggt gctgactggg caccggcacg agaaagtgga ggccgtgctg
3181 tcccgctcca accagggcgt ggcccgcgta gactccggtg gctacgagcc tgagggcctg
3241 gagaataagc cggtggccga gagccagccc agcccgggca ccctgggcgt cttcagcctc
3301 atcctgccgc tgcaggccgg ggacacggtc tgcgtcgacc tggtcatggg gcagctggcg
3361 cactcggagg agccgctcac catcttcagc ggggccctgc tctatgggga cccagagctt
3421 gaacacgcgt agactggggt cccgcccgac gtgtctacgt cggctgaaga gacagcgggg
3481 gcggcgggct cctggggtct cgcctgagac ggggcaccta gccctgggcg agcgccgcac
3541 ccgggcccgc agcggcaccg cgcccagagc ggcctctccc cacgcccggg gcgcgccggc
3601 tcagggaggc tcggggccgc ccatgcagac ttttggcctg gcgcgatccc ccaagaaccc
3661 ctccagggcc ggcctgcgga ggagccgatc ctcgcaccct ccgctccctc cactggccct
3721 ccaggtcgat tccctgggct ccaggctccc ccgcgcgggc gccgcccacc gccatactaa
3781 acgatcgagg aataaagaca cttggttttt ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3841 aaaaaa
//