LOCUS BC142654 2932 bp mRNA linear HUM 11-JUN-2007
DEFINITION Homo sapiens glutamate receptor, ionotrophic, AMPA 4, mRNA (cDNA
clone IMAGE:40148067), complete cds.
ACCESSION BC142654
VERSION BC142654.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2932)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2932)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: g Column: 10
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2932
/db_xref="H-InvDB:HIT000435357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40148067"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..2932
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
CDS 395..1696
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/codon_start=1
/product="glutamate receptor, ionotrophic, AMPA 4"
/protein_id="AAI42655.1"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
/translation="MRIISRQIVLLFSGFWGLAMGAFPSSVQIGGLFIRNTDQEYTAF
RLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRS
VHTLTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLLDHYEWNCFVFLYDT
DRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERL
QNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLM
DRWKKLDQREYPGSETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLAN
PAAPWGQGIDMERTLKQVRIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWND
MDKLVLIQDVPTLGNDTAAIENRTVVVTTIMPLMKNPILRN"
BASE COUNT 921 a 528 c 639 g 844 t
ORIGIN
1 ggcagcccgt cctcctcacg aacctgcaag gatgcggcag gggcctgggg gcatggggag
61 gtactaaccc cccggagccc ccgattgggg cttgcagacc tggcccgtgg gcggattttc
121 tgcctagcgc agccgagaag cagaggtgcc aggaaaacca agagaggggc gctgggggtg
181 cccatcccca gagtcggtcc ctctgcgaac cgaggaagaa aagaggaggg agtcagcgag
241 tggtcagaag ggaaaacctg acaccagact ggctccggag cgtccgggag actggggcgc
301 tccgcgccat cgtcttcaat gcttctctga acagccttta ggaagagtgc gagagaaaga
361 gagagagcgc gcgccaggga gaggagaaaa gaagatgagg attatttcca gacagattgt
421 cttgttattt tctggatttt ggggactcgc catgggagcc tttccgagca gcgtgcaaat
481 aggtggtctc ttcatccgaa acacagatca ggaatacact gcttttcgat tagcaatttt
541 tcttcataac accagcccca atgcgtcgga agctcctttt aatttggtac ctcatgtgga
601 caacattgag acagccaaca gttttgctgt aacaaacgcc ttctgttccc agtattctag
661 aggagtattt gccatttttg gactctatga taagaggtcg gtacatacct tgacctcatt
721 ctgcagcgcc ttacatatct ccctcatcac accaagtttc cctactgagg gggagagcca
781 gtttgtgctg caactaagac cttcgttacg aggagcactc ttgagtttgc tggatcacta
841 cgaatggaac tgttttgtct tcctgtatga cacagacagg ggatactcga tactccaagc
901 tattatggaa aaagcaggac aaaatggttg gcatgtcagc gctatatgtg tggaaaattt
961 taatgatgtc agctataggc aacttctaga agaacttgac agaagacaag agaagaagtt
1021 tgtaatagac tgtgagatag agagacttca aaacatatta gaacagattg taagtgttgg
1081 aaagcatgtt aaaggctacc attatatcat tgcaaacttg ggattcaagg atatttctct
1141 tgagaggttt atacatggtg gagccaatgt tactggattc cagttggtgg attttaatac
1201 acctatggta atcaaactaa tggatcgctg gaagaaacta gatcagagag agtatccagg
1261 atctgagact cctccaaagt acacctctgc tctgacttat gatggagtcc ttgtgatggc
1321 tgaaactttc cgaagtctta ggaggcagaa aattgatatc tcaaggagag gaaatgctgg
1381 ggattgtctg gcaaatcctg ctgctccatg gggccaggga attgacatgg agaggacact
1441 caaacaggtt cgaattcaag ggctgacagg gaatgttcag tttgaccact atggacgtag
1501 agtcaattac acaatggatg tgtttgagct gaaaagcaca ggacctagaa aggttggtta
1561 ctggaatgat atggataagt tagtcttgat tcaagatgta ccaactcttg gcaatgacac
1621 agctgctatt gagaacagaa cagtggttgt aaccacaatt atgcctctga tgaagaatcc
1681 tattttaaga aattgatcaa gaaagaaaag agttccgcgc tgttcgacca ttcctaacta
1741 aggctcaagt cttgttctcc agtgtagtaa atttaagctt atttttcatg tgggattctt
1801 cttggatgac caactctgga ctaccagaaa aaaaaaattt taagttctgt gacttttctg
1861 agatactaga acaaaagaag aattaatctt catctttctc aagaaataga tgttgacaaa
1921 gaatcactta gcgattctga catatcaatt cccctatctt gaaatgaggt cactgtatgt
1981 aaatgatgga attatatcac tccatttcca agggtagatt ttctataagt aaatatctcg
2041 gaatttgtgt gcttgttttc tgaatatata cagttgtttt ctttaaagat ctcttggaat
2101 tttgcctgtt ctgtgtgaaa taaagtgttt taatgtgcat tataggtatg atatagagaa
2161 tctcctttcc atccttgtta ctaaagggac tggacaaata aatcttaaaa ccaaaatact
2221 gaattaattt tgcaagcatg gctagttttt aggaagcatg ctatcaaaaa aaaaaagact
2281 aaaaatgact gaaaaaatcc aactgtttta tatatatata aatatatata tatttatata
2341 tatatataaa ggatattctg taaagttata tgttgtttga cagtaaagcc atcaatattt
2401 ttgctatcaa aatagtataa tactagtatc tttttgtatg aaaatgtaat ctttatataa
2461 ataatacctc tgatatttgc aactgcataa tcgttcagta attcaaaaag acatactaga
2521 atcctttttc tgaaagtgtt ccttcaattt gcttttgttg aaaacggtag tccaggacct
2581 atgatatccc tccacttcat tcattatgaa agaaatccct tgtagataaa caagatattg
2641 gcatctgcat gtaattatcc ccagattcag ctgaaaactc ccaacacaga tggaattggc
2701 tagacatttt aatatatgtg atacctatat ctagatatag aaggctgaga gtgagcactg
2761 gatataattc attttgattg aaattgatat ggtgttattg ttcttccagt tgtctgtcct
2821 ttgtgtatgt tcttatttat atgttgatac actgtaacac tatatgctat tgctaaataa
2881 aattgattga gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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