LOCUS BC142629 1662 bp mRNA linear HUM 23-JUL-2007 DEFINITION Homo sapiens mucosal vascular addressin cell adhesion molecule 1, mRNA (cDNA clone MGC:164805 IMAGE:40147551), complete cds. ACCESSION BC142629 VERSION BC142629.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1662) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1662) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Novartis Institute for Biomedical Research cDNA Library Preparation: Novartis Institute for Biomedical Research cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 306 Row: c Column: 24. FEATURES Location/Qualifiers source 1..1662 /db_xref="H-InvDB:HIT000435332" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:164805 IMAGE:40147551" /tissue_type="Donated clones,Novartis FGA collection" /clone_lib="NIH_MGC_417" /lab_host="DH5a" /note="Vector: pCMV-SPORT6" gene 1..1662 /gene="MADCAM1" /gene_synonym="MACAM1" /db_xref="GeneID:8174" /db_xref="HGNC:HGNC:6765" /db_xref="MIM:102670" CDS 7..1227 /gene="MADCAM1" /gene_synonym="MACAM1" /codon_start=1 /product="MADCAM1 protein" /protein_id="AAI42630.1" /db_xref="GeneID:8174" /db_xref="HGNC:HGNC:6765" /db_xref="MIM:102670" /translation="MDFGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQ LTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT FQHTVQLLVYAFPDQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEG AQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHR QAIPVLHSPTSPEPPDTTSPEPPNTTSPESPDTTSPESPDTTSQEPPDTTSQEPPDTT SQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGS SKPAGDQLPAALWTSSAVLGLLLLALPTYHLWKRCRHLAEDDTHPPASLRLLPQVSAW AGLRGTGQVGISPS" BASE COUNT 328 a 613 c 455 g 266 t ORIGIN 1 ctgagcatgg atttcggact ggccctcctg ctggcggggc ttctggggct cctcctcggc 61 cagtccctcc aggtgaagcc cctgcaggtg gagcccccgg agccggtggt ggccgtggcc 121 ttgggcgcct cgcgccagct cacctgccgc ctggcctgcg cggaccgcgg ggcctcggtg 181 cagtggcggg gcctggacac cagcctgggc gcggtgcagt cggacacggg ccgcagcgtc 241 ctcaccgtgc gcaacgcctc gctgtcggcg gccgggaccc gcgtgtgcgt gggctcctgc 301 gggggccgca ccttccagca caccgtgcag ctccttgtgt acgccttccc ggaccagctg 361 accgtctccc cagcagccct ggtgcctggt gacccggagg tggcctgtac ggcccacaaa 421 gtcacgcccg tggaccccaa cgcgctctcc ttctccctgc tcgtcggggg ccaggaactg 481 gagggggcgc aagccctggg cccggaggtg caggaggagg aggaggagcc ccagggggac 541 gaggacgtgc tgttcagggt gacagagcgc tggcggctgc cgcccctggg gacccctgtc 601 ccgcccgccc tctactgcca ggccacgatg aggctgcctg gcttggagct cagccaccgc 661 caggccatcc ccgtcctgca cagcccgacc tccccggagc ctcccgacac cacctccccg 721 gagcctccca acaccacctc cccggagtct cccgacacca cctccccgga gtctcccgac 781 accacctccc aggagcctcc cgacaccacc tcccaggagc ctcccgacac cacctcccag 841 gagcctcccg acaccacctc cccggagcct cccgacaaga cctccccgga gcccgccccc 901 cagcagggct ccacacacac ccccaggagc ccaggctcca ccaggactcg ccgccctgag 961 atctcccagg ctgggcccac gcagggagaa gtgatcccaa caggctcgtc caaacctgcg 1021 ggtgaccagc tgcccgcggc tctgtggacc agcagtgcgg tgctgggact gctgctcctg 1081 gccttgccca cctatcacct ctggaaacgc tgccggcacc tggctgagga cgacacccac 1141 ccaccagctt ctctgaggct tctgccccag gtgtcggcct gggctgggtt aagggggacc 1201 ggccaggtcg ggatcagccc ctcctgagtg gccagccttt ccccctgtga aagcaaaata 1261 gcttggaccc cttcaagttg agaactggtc agggcaaacc tgcctcccat tctactcaaa 1321 gtcatccctc tgctcacaga gatggatgca tgttctgatt gcctctttgg agaagctcat 1381 cagaaactca aaagaaggcc actgtttgtc tcacctaccc atgacctgaa gcccctccct 1441 gagtggtccc cacctttctg gacggaacca cgtacttttt acatacattg attcatgtct 1501 cacgtctccc taaaaatgcg taagaccaag ctgtgccctg accaccctgg gcccctgtcg 1561 tcaggacctc ctgaggcttt ggcaaataaa cctcctaaaa tgataaaaaa aaaaaaaaaa 1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //