LOCUS BC142624 3317 bp mRNA linear HUM 11-JUN-2007
DEFINITION Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
clone MGC:164797 IMAGE:40147481), complete cds.
ACCESSION BC142624
VERSION BC142624.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3317)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3317)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: c Column: 16.
FEATURES Location/Qualifiers
source 1..3317
/db_xref="H-InvDB:HIT000435327"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164797 IMAGE:40147481"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..3317
/gene="VWCE"
/gene_synonym="URG11"
/gene_synonym="VWC1"
/db_xref="GeneID:220001"
/db_xref="HGNC:HGNC:26487"
CDS 27..2894
/gene="VWCE"
/gene_synonym="URG11"
/gene_synonym="VWC1"
/codon_start=1
/product="von Willebrand factor C and EGF domains"
/protein_id="AAI42625.1"
/db_xref="GeneID:220001"
/db_xref="HGNC:HGNC:26487"
/translation="MWAGLLLRAACVALLLPGAPARGYTGRKPPGHFAAERRRLGPHV
CLSGFGSGCCPGWAPSMGGGHCTLPLCSFGCGSGICIAPNVCSCQDGEQGATCPETHG
PCGEYGCDLTCNHGGCQEVARVCPVGFSMTETAVGIRCTDIDECVTSSCEGHCVNTEG
GFVCECGPGMQLSADRHSCQDTDECLGTPCQQRCKNSIGSYKCSCRTGFHLHGNRHSC
VDVNECRRPLERRVCHHSCHNTVGSFLCTCRPGFRLRADRVSCEAFPKAVLAPSAILQ
PRQHPSKMLLLLPEAGRPALSPGHSPPSGAPGPPAGVRTTRLPSPTPRLPTSSPSAPV
WLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSPRGPESPRLAAGPSPCWHLGAM
HESRSRWTEPGCSQCWCEDGKVTCEKVRCEAACSHPIPSRDGGCCPSCTGCFHSGVVR
AEGDVFSPPNENCTVCVCLAGNVSCISPECPSGPCQTPPQTDCCTCVPVRCYFHGRWY
ADGAVFSGGGDECTTCVCQNGEVECSFMPCPELACPREEWRLGPGQCCFTCQEPTPST
GCSLDDNGVEFPIGQIWSPGDPCELCICQADGSVSCKRTDCVDSCPHPIRIPGQCCPD
CSAGCTYTGRIFYNNETFPSVLDPCLSCICLLGSVACSPVDCPITCTYPFHPDGECCP
VCRDCNYEGRKVANGQVFTLDDEPCTRCTCQLGEVSCEKVPCQRACADPALLPGDCCS
SCPDSLSPLEEKQGLSPHGNVAFSKAGRSLHGDTEAPVNCSSCPGPPTASPSRPVLHL
LQLLLRTNLMKTQTLPTSPAGAHGPHSLALGLTATFPGEPGASPRLSPGPSTPPGAPT
LPLASPGAPQPPPVTPERSFSASGAQIVSRWPPLPGTLLTEASALSMMDPSPSKTPIT
LLGPRVLSPTTSRLSTALAATTHPGPQQPPVGASRGEESTM"
BASE COUNT 595 a 1068 c 963 g 691 t
ORIGIN
1 gcccggggga cccgccgccg ccggtcatgt gggccggact gctccttcgg gccgcctgtg
61 tcgcgctcct gctgccgggg gcaccagccc gaggctacac cgggaggaag ccgcccgggc
121 acttcgcggc cgagagacgc cgactgggcc cccacgtctg cctctctggg tttgggagtg
181 gctgctgccc tggctgggcg ccctctatgg gtggtgggca ctgcaccctg cccctctgct
241 ccttcggctg tgggagtggc atctgcatcg ctcccaatgt ctgctcctgc caggatggag
301 agcaaggggc cacctgccca gaaacccatg gaccatgtgg ggagtacggc tgtgacctta
361 cctgcaacca tggaggctgt caggaggtgg cccgagtgtg ccccgtgggc ttctcgatga
421 cggagacagc tgttggcatc aggtgtacag acattgacga atgtgtaacc tcctcctgcg
481 agggccactg tgtgaacaca gaaggtgggt ttgtgtgcga gtgtgggccg ggcatgcagc
541 tgtctgccga ccgccacagc tgccaagaca ctgacgaatg cctagggact ccctgtcagc
601 agagatgtaa aaacagcatt ggcagctaca agtgttcctg tcgaactggc ttccaccttc
661 atggcaaccg gcactcctgt gtagatgtaa acgagtgtcg gaggccattg gagaggcgag
721 tctgtcacca ttcctgccac aacaccgtgg gcagcttcct atgcacatgc cgacctggct
781 tcaggctccg agctgaccgc gtgtcctgtg aagctttccc gaaagccgtg ctggccccat
841 ctgccatcct gcaaccccgg caacacccgt ccaagatgct tctgttgctt cctgaggccg
901 gccggcctgc cctgtcccca ggacatagcc ctccttctgg ggctccaggg cccccagccg
961 gagtcaggac cacccgcctg ccatctccca ccccacgact acccacatcc tccccttctg
1021 cccctgtgtg gctgctgtcc accctgctgg ccaccccagt gcctactgcc tccctgctgg
1081 ggaacctcag acccccctca ctccttcagg gggaggtgat ggggacccct tcctcaccca
1141 ggggccctga gtccccccga ctggcagcag ggccctctcc ctgctggcac ctgggagcca
1201 tgcatgaatc aaggagtcgc tggacagagc ctgggtgttc ccagtgctgg tgcgaggacg
1261 ggaaggtgac ctgtgaaaag gtgaggtgtg aagctgcttg ttcccaccca attccctcca
1321 gagatggtgg gtgctgccca tcgtgcacag gctgttttca cagtggtgtc gtccgagctg
1381 aaggggatgt gttttcacct cccaatgaga actgcaccgt ctgtgtctgt ctggctggaa
1441 acgtgtcctg catctctcct gagtgtcctt ctggcccctg tcagaccccc ccacagacgg
1501 attgctgtac ttgtgttcca gtgagatgct atttccacgg ccggtggtac gcagacgggg
1561 ctgtgttcag tgggggtggt gacgagtgta ccacctgtgt ttgccagaat ggggaggtgg
1621 agtgctcctt catgccctgc cctgagctgg cctgcccccg agaagagtgg cggctgggcc
1681 ctgggcagtg ttgcttcacc tgccaggagc ccacaccctc gacaggctgc tctcttgacg
1741 acaacggggt tgagtttccg attggacaga tctggtcgcc tggtgacccc tgtgagttat
1801 gcatctgcca ggcagatggc tcggtgagct gcaagaggac agactgtgtg gactcctgcc
1861 ctcacccgat ccggatccct ggacagtgct gcccagactg ttcagcaggc tgcacctaca
1921 caggcagaat cttctataac aacgagacct tcccgtctgt gctggaccca tgtctgagct
1981 gcatctgcct gctgggctca gtggcctgtt cccccgtgga ctgccccatc acctgtacct
2041 accctttcca ccctgacggg gagtgctgcc ccgtgtgccg agactgcaac tacgagggaa
2101 ggaaggtggc gaatggccag gtgttcacct tggatgatga accctgcacc cggtgcacgt
2161 gccagctggg agaggtgagc tgtgagaagg ttccctgcca gcgggcctgt gccgaccctg
2221 ccctgcttcc tggggactgc tgctcttcct gtccagattc cctgtctcct ctggaagaaa
2281 agcaggggct ctcccctcac ggaaatgtgg cattcagcaa agctggtcgg agcctgcatg
2341 gagacactga ggcccctgtc aactgtagct cctgtcctgg gcccccgaca gcatcaccct
2401 cgaggccggt gcttcatctc ctccagctcc ttttaagaac gaacttgatg aaaacacaga
2461 ctttacctac aagcccggca ggagctcatg gtccacactc actcgctttg gggctgacag
2521 ccactttccc aggggagcct ggggcctccc ctcgactctc accagggcct tcgacccctc
2581 caggagcccc cactctacct ctagcttccc caggggctcc tcagccacct cctgtgactc
2641 cagagcgctc gttctcagcc tctggggccc agatagtgtc caggtggcct cctctgcctg
2701 gcaccctcct gacggaagct tcagcacttt ccatgatgga ccccagcccc tcgaagaccc
2761 ccatcaccct cctcgggcct cgcgtgcttt ctcccaccac ctctagactc tccacagccc
2821 ttgcagccac cacccaccct ggcccccagc agcccccagt gggggcttct cggggggaag
2881 agtccaccat gtaaggaggt cactgtgtcc gggagactct ggagagagga cctctgccag
2941 tggcccaggg tgtgtgcagg gcagctccaa ggatgaacct ggtggggatg cctgggctcc
3001 ctcctgcagg ggccctggtg aggatggaag acccccaagg ctggatgtaa ccttgttccc
3061 aagaagtgtt tggaatgtgc tgtaagaatg gaggaagtcg tttccactgt cagcatcctc
3121 cctggaccgc gtggctggct catcttttga gaagggttgg gactgccaag ttctcctgga
3181 ggaagagttg cgtccggctg ggattccact cactgggact gtaccgccag gtgtcatgcg
3241 tctctctgag gtttcctgat taaaggttgt ctcggtttca aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaaa aaaaaaa
//