LOCUS BC142621 1820 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens chromosome 8 open reading frame 85, mRNA (cDNA clone
MGC:164794 IMAGE:40147448), complete cds.
ACCESSION BC142621
VERSION BC142621.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1820)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: c Column: 13.
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000435324"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164794 IMAGE:40147448"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..1820
/gene="C8orf85"
/gene_synonym="AARD"
/db_xref="GeneID:441376"
/db_xref="HGNC:HGNC:33842"
CDS 20..487
/gene="C8orf85"
/gene_synonym="AARD"
/codon_start=1
/product="chromosome 8 open reading frame 85"
/protein_id="AAI42622.1"
/db_xref="GeneID:441376"
/db_xref="HGNC:HGNC:33842"
/translation="MGPGDFRRCRERISQGLQGLPGRAELWFPPRPACDFFGDGRSTD
IQEEALAASPLLEDLRRRLTRAFQWAVQRAISRRVQEAAAAAAAREEQSWTRVEATLA
RLRAELVEMHFQNHQLARTLLDLNMKVQQLKKEYELEITSDSQSPKDDAANPE"
BASE COUNT 520 a 400 c 469 g 431 t
ORIGIN
1 gtgaccaggc gtctccgcga tgggccccgg ggacttccgc cgctgcagag agagaatttc
61 ccaggggctc cagggactcc caggtagagc ggagctttgg ttcccacctc gtcccgcgtg
121 cgacttcttc ggggacggca ggagcacgga catccaggag gaggccctcg ccgccagccc
181 gctgctggag gacctcagac gacggctgac gcgcgccttc cagtgggcgg tgcagcgcgc
241 gatctcgagg cgcgtgcagg aggcggcggc ggcggcggcg gcgcgggagg agcagagctg
301 gacgcgcgtt gaggccaccc tggccaggct gcgggcggag ctggtggaaa tgcatttcca
361 aaaccaccag ctggctagaa ctttactgga cctaaacatg aaagtgcagc aattgaaaaa
421 ggagtatgaa ctggaaatta catcagactc ccaaagccca aaagatgatg ctgcgaatcc
481 ggaataaaga aatgcacacg caagggctgg gcgcggtggc tcacgcctgt aatcccagca
541 ctttgggagg ctgaggcggg cggatcaaga cgtcaggaga ttgagaccat cctggctaac
601 actgtgaaac cctgcctcta ctaaaaatac aaaaaattag ccagacgtgg tggcaggcac
661 ctgtagtccc tgctactcag gagtctgagg caggagaatg gcgtgaaccc aggagacaga
721 gcttgcagtg agccgaaatc ctgccactgc actccagcct gggtgacaga gcaagactcc
781 atctcaaaaa aaaaaaaaaa aaaaaaaagc acacgcgaag ctctggatcc taaaactaac
841 gcatacaacc ctgaaacaat tctgatgaac acattatgct ttgcataagt tttgaggggc
901 aatttataga cccaaaacaa atgacagggg aaggtgacag aaaaacatct aagagagggg
961 agagaaaaat gatgtattac caagttttaa agttatttat ttgttatttt tactgggaca
1021 tagaagtaaa atataactat agataaatct ctctctgtct ctctcactca aagaatgctt
1081 taatgccaac tttcggtatt caaccttgtg tcacctgacc tttctggcat tgcctgagct
1141 ttcagagttt gtgcttgttt tgttttactt gattattctc agtttgtctg tccagcagcc
1201 tgccctgctt cttgtggaga attgtttcta cttggattct aaccatgccc tttaggtggt
1261 ctgtgactaa gggtattcca tcttcctgga tatagtcatg cagctcaagg caggcagatg
1321 ggtttgtcct taggattttt gaatgggcac taaaagagta gatgactatt tctgccagta
1381 gaagctgtgg atcaggggct tggaagctgc tggtggtcac catgtgagaa agcccacacc
1441 ctaatggagg tgactgaaac ggaaccacta aaagcacaaa aggggaggga gggagggagg
1501 gtgcttcgct tccttgttcc tggggtcaag ctgtataaga ctccaggcct tgctcttgtt
1561 tatgtacatg aaatattctg atatccttct cataaaatct ctttttgcct aagtaaattc
1621 aagctggagt ttcatgactt gtatctagtg ttcataacta atacagttgt tcagttttag
1681 gagttaaaat ggttcttact gttgaattgg actatctaac tgtacccgaa aagtgctgtc
1741 tttttaatgc aaacagtaaa gttaataaaa aatagttgca gatctaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa
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