LOCUS BC142620 3468 bp mRNA linear HUM 11-JUN-2007
DEFINITION Homo sapiens T-box 4, mRNA (cDNA clone MGC:164791 IMAGE:40147430),
complete cds.
ACCESSION BC142620
VERSION BC142620.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3468)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3468)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: c Column: 10.
FEATURES Location/Qualifiers
source 1..3468
/db_xref="H-InvDB:HIT000435323"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164791 IMAGE:40147430"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..3468
/gene="TBX4"
/gene_synonym="SPS"
/db_xref="GeneID:9496"
/db_xref="HGNC:HGNC:11603"
/db_xref="MIM:601719"
CDS 164..1804
/gene="TBX4"
/gene_synonym="SPS"
/codon_start=1
/product="TBX4 protein"
/protein_id="AAI42621.1"
/db_xref="GeneID:9496"
/db_xref="HGNC:HGNC:11603"
/db_xref="MIM:601719"
/translation="MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAAL
GSPPGPGADVVAAAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKV
KVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAH
WMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHV
FPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMR
QRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFY
HCLKRRADGTRHLDLPCKRSYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREA
CMYSGSGPEIAGVSGVDDLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPTHFTAT
TMMPRLPTLSAQSSQPPGNAHFSVYNQLSQSQVRERGPSASFPRERGLPQGCERKPPS
PHLNAANEFLYSQTFSLSRESSLQYHSGMGTVENWTDG"
BASE COUNT 907 a 926 c 866 g 769 t
ORIGIN
1 ctccagagcc gggatgtgtc cagccccgag ggcacggcag gcagctggac cctgacccag
61 cggcgcggag tcggagcccc ggccgtcccg cgctcctcgg acccgaacct gcaggggacc
121 tcgggccgct ggcgcctccg catgcggcac cgcaattagg gagatgctgc aggataaggg
181 cctgtccgag agcgaggagg ccttccgggc cccgggccca gcgctcggag aggccagcgc
241 agccaacgcc cccgagcccg cgctggcagc gccgggcctc agcggagccg cgctaggcag
301 ccccccggga cccggggccg acgtcgtcgc cgccgccgcc gcggagcaga ccatcgagaa
361 catcaaggtg gggctgcatg agaaggagct ctggaagaag ttccacgagg cgggcaccga
421 gatgatcatc actaaggctg gcaggaggat gttccccagc tacaaggtaa aagtcacagg
481 catgaacccc aagaccaagt atatcctgct gattgacatt gtccctgccg atgaccatcg
541 ctacaagttc tgtgacaaca aatggatggt ggcagggaag gctgagccag ccatgccagg
601 aaggctgtat gtccacccgg attctcctgc cacaggagcc cactggatgc ggcagctggt
661 ctccttccag aagctgaagc tgacaaacaa ccacctggac ccctttggcc atatcatcct
721 caactctatg cacaagtacc agccgcggct ccacatcgtt aaggctgatg agaacaatgc
781 tttcggctcc aaaaacactg ctttctgcac ccacgtgttc ccagagacct ccttcatctc
841 tgtgacctcc taccagaatc acaagatcac ccagctgaaa attgagaaca acccttttgc
901 caagggattc cggggcagtg atgacagtga cctgcgtgtg gcccgactgc agagcaaaga
961 ataccccgtg atttccaaaa gcatcatgag gcagaggctc atctcccccc agctctcagc
1021 cacaccggac gtgggccccc tgctcggcac ccaccaggca ctccagcact accagcacga
1081 gaacggggca cactcacagc tcgcggagcc gcaggacctg cccctcagca cctttcccac
1141 ccagagggac tcaagcctct tctatcactg cctgaaaaga cgagcagacg gtacccgcca
1201 cctggactta ccttgcaagc gatcctatct ggaagccccc tcttcggtgg gggaggatca
1261 ctatttccgt tccccccctc cctacgacca gcaaatgctg agcccctcct actgcagtga
1321 ggtgaccccc agagaagcat gtatgtactc aggttcaggg cccgagattg ccggggtgtc
1381 tggggtggac gacctgcccc cacctccgct gagctgtaac atgtggactt cagtgtcgcc
1441 gtacaccagc tatagcgtgc agacgatgga gactgtgccg taccagccct tccccacgca
1501 cttcaccgcc accaccatga tgccgcggct gcccaccctc tccgctcaga gctcccagcc
1561 accaggaaat gcccacttta gtgtctacaa tcagctctcc cagtctcagg tccgagagcg
1621 ggggcccagc gcctcattcc caagagagcg cggcctcccc caagggtgtg agaggaagcc
1681 accctcgcca catctaaatg ctgccaatga gtttctctac tctcaaacct tctccttgtc
1741 ccgagaatct tccttacagt accattcagg aatggggact gtggagaact ggactgacgg
1801 atgactctca cgtctcctcc atagccccgg gaccgtgttg ctccagtatt aacctctgtg
1861 ggtggcctgc actctaccaa gaaacacagg aaggtattcc agtgtgtgtg tgtgtgtgtg
1921 tgtgtgtgtg tgtgtgtgtg tgtatacacg agcatgtatg tatttggaga gcatccatct
1981 tctgacatac aactgaggtc atgacaagga aaaaaaacac cacatttatc taagaagtga
2041 ttttggctgc aggacctggg tctattgtta tctgacatct cttgacatgc ccgtgggtgg
2101 gatgggagtg gagggttcat atgagttatt gagagggttt tataatggtt gatttactca
2161 ggggccaggt ggggagttct ctcccatggg gaaagattct cactgctggg gtgggaagat
2221 tctcgctgct ggggtgtgag gactctgtgc acaccttaga gttcctggcc ttctctttgc
2281 aaggggagct gagaatctgg ttttggtagc aggaggccca ctcctttgac ttctggagag
2341 tctgtgagac tgcctgagag gtgggctcag ctaagccaca atgtgtactt tgatagtaca
2401 gctggctgct cagtgagtgg cctagacatt gatgactgga gctctgaggt ctgagggatg
2461 acgttcggaa agggtcatgg gctaaatgtc acctgagggg tatttttaaa gggttttttt
2521 ttcccttcaa gaggagggaa aatgcaacca gtagcatctc tgtcatcatt cagattttgt
2581 aataaagtac agagcccttc cccctaggtc cccaacatac agtctctcac tctggtgtgt
2641 ggagagtcag cctcccaggc accataccat ctgcatccta tgatgatggg caattatgaa
2701 acacgcctca gctggcatca tccccaggag gccacactgg agctgatgtc tggcatctcc
2761 agggcctgtt ctgctctcag aaaatctacg cttctggagc gagaaaggcc aacagaaata
2821 aagatagttg aaaaaaattt gtttcttcca gtaaattcag ccggtgagct cagaggagca
2881 aagagaattc tccagtgtgg cgctcacaaa gtcctcagcc ctgcgtttta gcattgaata
2941 ccaccaggcc atcagtgtgg ctggggtgaa ctctccatca aacttgggaa atcactaaac
3001 tctttgcatg ctgaatagct atttatatat tatataaata aataaatata tatattatat
3061 atcgctctct ctcacaaatg caggccacat gtcaaattca gctttgcttt ctacaaatga
3121 atgaacttaa taaaaataaa cgttggaggg ggtatttgga aagacatcta tttaaatttt
3181 tattacatgt ttgatattaa aaactaagaa tggtttagat aaaacatata aataaatata
3241 tatatatata tatatatata aacacacaca cactacagat aaggcttttt tagaaaacac
3301 attagctaac aggtgatatg gaacttcaag tgttttgtta tatagcatgg atgttttatt
3361 ttgcatatcg gaacataaag ccattttaca actgtgaaaa aaaaaaaaaa aaaaaaaaaa
3421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//