LOCUS BC142616 3227 bp mRNA linear HUM 11-JUN-2007 DEFINITION Homo sapiens leucine rich repeat and fibronectin type III domain containing 2, mRNA (cDNA clone MGC:164779 IMAGE:40147341), complete cds. ACCESSION BC142616 VERSION BC142616.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3227) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3227) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Novartis Institute for Biomedical Research cDNA Library Preparation: Novartis Institute for Biomedical Research cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 306 Row: b Column: 22. FEATURES Location/Qualifiers source 1..3227 /db_xref="H-InvDB:HIT000435319" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:164779 IMAGE:40147341" /tissue_type="Donated clones,Novartis FGA collection" /clone_lib="NIH_MGC_417" /lab_host="DH5a" /note="Vector: pCMV-SPORT6" gene 1..3227 /gene="LRFN2" /gene_synonym="RP11-535K1.2" /db_xref="GeneID:57497" /db_xref="HGNC:HGNC:21226" CDS 452..2821 /gene="LRFN2" /gene_synonym="RP11-535K1.2" /codon_start=1 /product="leucine rich repeat and fibronectin type III domain containing 2" /protein_id="AAI42617.1" /db_xref="GeneID:57497" /db_xref="HGNC:HGNC:21226" /translation="METLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLL FVPPDIDRRTVELRLGGNFIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESL RSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNN LHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIF ARSQASALTATPFAPPLSFSFGGNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYF WHVREEEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSS RTAVYDNGTLDIFITTSQDSGAFTCIAANAAGEATAMVEVSIVQLPHLSNSTSRTAPP KSRLSDITGSSKTSRGGGGSGGGEPPKSPPERAVLVSEVTTTSALVKWSVSKSAPRVK MYQLQYNCSDDEVLIYRMIPASNKAFVVNNLVSGTGYDLCVLAMWDDTATTLTATNIV GCAQFFTKADYPQCQSMHSQILGGTMILVIGGIIVATLLVFIVILMVRYKVCNHEAPS KMAAAVSNVYSQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASDSSSS SSLGSGEAAGLGRAPWRIPPSAPRPKPSLDRLMGAFASLDLKSQRKEELLDSRTPAGR GAGTSARGHHSDREPLLGPPAARARSLLPLPLEGKAKRSHSFDMGDFAAAAAGGVVPG GYSPPRKVSNIWTKRSLSVNGMLLPFEESDLVGARGTFGSSEWVMESTV" BASE COUNT 688 a 1019 c 915 g 605 t ORIGIN 1 cgctgagaca cacatacact cacacataca caacccggca ggctcgtctg aacttgaaga 61 caccccacat tccaagatgc ccgaggttcc tgggaatgcc tggggttctt cgatccggaa 121 aatcctaccg gcatcctcct agggagggat tattattatt atttttcttt aatctggaag 181 agaagagaac aagttgtgct tttcccccct tcttcttgct aaatgccatg gatataactg 241 aataagcggc tcagggcttt ccccgcgtgg acgtccgagg ccaccatctg cctgcattcg 301 ccggagccgc cggagggttt agctcgagtc tgtctcgggc ggggaaggat gcgtggccga 361 gccggggagc ccgggcgccc cgcggagccg gcctcggtgc cacccagccg ggggtagatg 421 ctgcctcgcc caggcgctga gtgaccagac catggagacc ctgcttggtg gcctgctagc 481 gtttggcatg gcgtttgccg tggtcgacgc ctgccccaag tactgtgtct gccagaatct 541 gtctgagtca ctggggaccc tgtgcccctc caaggggctg ctctttgtac cccctgatat 601 tgaccggcgg acagtggagc tgcgcctggg cggcaacttc atcatccaca tcagccgcca 661 ggactttgcc aacatgacgg ggctggtgga cctgaccctg tccaggaaca ccatcagcca 721 catccagccc ttttcctttc tggacctcga gagcctccgc tccctgcatc ttgacagcaa 781 tcggctgcca agccttgggg aggacaccct ccggggcctg gtcaacctgc agcaccttat 841 cgtgaacaac aaccagctgg gcggcatcgc agatgaggct tttgaggact tcctgctgac 901 attggaggat ctggacctct cctacaacaa cctccatggc ctgccgtggg actccgtgcg 961 acgcatggtc aacctccacc agctgagcct ggaccacaac ctgctggatc acatcgccga 1021 gggcaccttt gcagacctgc agaaactggc ccgcctggat ctcacctcca atcggctgca 1081 gaagctgccc cctgatccca tctttgcccg ctcccaggct tcggctttga cagccacacc 1141 ctttgcccca cccttgtcct ttagttttgg gggtaaccca cttcactgca attgtgagct 1201 tctctggctg cggaggctcg agcgggacga tgacctggaa acctgtggct ccccaggggg 1261 cctcaagggt cgctacttct ggcatgtgcg tgaggaggag tttgtgtgcg agccgcctct 1321 catcacccag cacacacaca agttgctggt tctggagggc caggcggcca cactcaagtg 1381 caaagccatt ggggacccca gcccccttat ccactgggta gcccccgatg accgcctggt 1441 agggaactcc tcaaggaccg ctgtctatga caatggcacc ctggacatct tcatcaccac 1501 atctcaggac agtggtgcct tcacctgcat tgctgccaat gctgccggag aggccacggc 1561 catggtggag gtctccatcg tccagctgcc acacctcagc aacagcacca gccgcactgc 1621 accccccaag tcccgcctct cagacatcac tggctccagc aagaccagcc ggggaggtgg 1681 aggcagtggg ggcggagagc ctcccaaaag ccccccggaa cgggctgtgc ttgtgtctga 1741 agtgaccacc acctcggccc tggtcaagtg gtctgtcagc aagtcagcac cccgggtgaa 1801 gatgtaccag ctgcagtaca actgctctga cgatgaggta ctgatttaca ggatgatccc 1861 agcctccaac aaggccttcg tggtcaacaa cctggtgtca gggactggct acgacttgtg 1921 tgtgctggcc atgtgggatg acacagccac gacactcacg gccaccaaca tcgtgggctg 1981 cgcccagttc ttcaccaagg ctgactaccc gcagtgccag tccatgcaca gccagattct 2041 gggcggcacc atgatcctgg tcatcggggg catcatcgtg gccacgctgc tggtcttcat 2101 cgtcatcctc atggtgcgct acaaggtctg caaccacgag gcccccagca agatggcagc 2161 ggccgtgagc aatgtgtact cgcagaccaa cggcgcccag ccaccgcctc caagcagcgc 2221 accagccggg gccccgccgc agggcccgcc gaaggtggtg gtgcgcaacg agctcctgga 2281 cttcaccgcc agcctggccc gcgccagtga ctcctcttcc tccagctccc tgggcagtgg 2341 ggaggctgcg gggctgggac gggccccctg gaggatccca ccctccgccc cgcgccccaa 2401 gcccagcctt gaccgcctga tgggggcctt cgcctccctg gacctcaaga gtcagagaaa 2461 ggaggagctg ctggactcca ggactccagc cgggagaggg gctgggacgt cggcccgggg 2521 ccaccactcg gaccgagagc cactgctggg gccccctgcg gcccgggcca ggagcctgct 2581 ccccttgccg ttggagggca aggccaaacg cagccactcc ttcgacatgg gggactttgc 2641 tgctgcggcg gcgggagggg tcgtgccggg cggctacagt cctcctcgga aggtctcgaa 2701 catctggacg aagcgcagcc tctctgtcaa cggcatgctc ttgccctttg aggagagtga 2761 cctggtgggg gcccggggga cttttggcag ctccgaatgg gtgatggaga gcacggtcta 2821 ggtgggggtg ggcatgctcc ctttcctgtg cgcagggtgg gagaagggga aagaatctca 2881 ctggcaagtg tttgtggagt ttccatggtg atgtttacat ccagggacag tttcgtctcc 2941 ctgtcaatgg cctcgtgtcc ccccctaccc cgcaacaccc acatcacctc cccaccaccc 3001 ggccggggtg tgctcaggga atgtggactc gctcaaatgc cggactgagc cctgagtgtt 3061 tggaaaggcg agactccgcc tttctaatca caaatgtagc ctacaagcaa gcggctttgg 3121 attgcttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //