LOCUS BC142608 4398 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens autoimmune regulator, mRNA (cDNA clone
IMAGE:40147125), with apparent retained intron.
ACCESSION BC142608
VERSION BC142608.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4398)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4398)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: a Column: 12
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4398
/db_xref="H-InvDB:HIT000435311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147125"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
BASE COUNT 897 a 1430 c 1255 g 816 t
ORIGIN
1 cgcgggggta taacagcggc gcgcgtggct cgcagaccgg ggagacgggc gggcgcacag
61 ccggcgcgga ggccccacag ccccgccggg acccgaggcc aagcgagggg ctgccagtgt
121 cccgggaccc accgcgtccg ccccagcccc gggtccccgc gcccacccca tggcgacgga
181 cgcggcgcta cgccggcttc tgaggctgca ccgcacggag atcgcggtgg ccgtggacag
241 cgccttccca ctgctgcacg cgctggctga ccacgacgtg gtccccgagg acaagtttca
301 ggagacgctt catctgaagg aaaaggaggg ctgcccccag gccttccacg ccctcctgtc
361 ctggctgctg acccaggact ccacagccat cctggacttc tggagggtgc tgttcaagga
421 ctacaacctg gagcgctatg gccggctgca gcccatcctg gacagcttcc ccaaagatgt
481 ggacctcagc cagccccgga aggggaggaa gcccccggcc gtccccaagg ctttggtacc
541 gccacccaga ctccccacca agaggaaggc ctcagaagag gctcgagctg ccgcgccagc
601 agccctgact ccaaggggca ccgccagccc aggtaccctc cctgcagggg aagccagcca
661 gggtctccag tcttcccggg cttccccggg agcccacgcc ccctccccac ccgggctccc
721 acccactggg tgtggggcca gcctgcctgg ggctgtgggg gtctcctctg ggtactagac
781 ccacacactg gaccagcctc tcagctccct cctgcctgaa ggctgagctc cccggagctg
841 gtgaagtagg cgggcgggtc tcatttccct tttactgatg agaaaccaga gcccggcaaa
901 gggactaccc agcactggac cgccccctcc acgccctccc accgcgggcc cctgcccacc
961 ggcactcacc cccactgaga ggggaggcca ggctgccccc agctccccca ttcaggctct
1021 caactgaagg ccaagccccc caagaagccg gagagcagcg cagagcagca gcgccttcca
1081 ctcgggaacg ggattcagac catgtcagct tcagtccaga gagctgtggc catgtcctcc
1141 ggggacgtcc cgggagcccg aggggccgtg gaggggatcc tcatccagca ggtgtttgag
1201 tcaggtagac gctgtggcgg ggagatgggg ctgatgggga gacccaggct ccaagatgga
1261 aggaggacca cgcccctttg catcctggtg gtcccacagc agaccggact gttgctcagg
1321 tagccagagt ttctgcctgt ggttctgctg actttggagg aggagggtga gcactgaagt
1381 ctccctgtcg ggggaccttc tgcaaggcca gcggtccagg cccacatccc cacccgggat
1441 gtacagcact ccccagtcac ctccatccat gtgcatgggc cctcctgggc catggggttg
1501 catccttaga aagttctgcc tgtgctgctg agaccctcca gggtatcggc attcttcaac
1561 caggacagcc tgtagcatag cgtccttgcc ccccataccc tggccagcct gcagcatcct
1621 cgcccgccat tccctggcca gccgctgacc ccatgcaatc accagtgcca tctgaccagg
1681 gcacagcagg gccgctggtg gcagacccac cgtgccatcg gggcattcca tctcaagtcc
1741 ctgacacggt gtctcctcgg tgctggacat gggctgggaa caccaagcac agccagggcc
1801 ctggtcttgc acctctggat ggtcccaagg cccactgtgt tacttcctaa ggctgttggt
1861 taaattggca caaactggga ggcttgaaat gacagaaatg ccaacatcga ggtgtctcgg
1921 ggccacactc cctctggagg ctccagggaa gaatccttcc ttgtgtctcc cagctgctgg
1981 tcattatggg ggtacccctg tgctccttgt tcctgggctc aggacccacc gctccagcct
2041 ctgcttctgt ggtctcacag ctgtctccca cgtgtcctct ttataaggac accagtcatt
2101 gaacttatgg tccagtgtga cctcatctta actaatcaca tctacaaaga ccctgatttc
2161 aagtaaggtc acactctgag gttctgggtg gacgtgaact tcgggggacg ctgttgaaca
2221 ccctggtgta gatccaggac aatccccggg ccccagactc gactggggtg ggggcgggct
2281 ggaggaatgc aggctgtggg aactccacct gtctctgcta gaccccaccc tggggcctac
2341 acgactgcca aggcaggtcc tgctgggcgg gtgagccagg accagccggc atctcctccc
2401 aggcggctcc aagaagtgca tccaggttgg cggggagttc tacactccca gcaagttcga
2461 agactccggc agtgggaaga acaaggcccg cagcagcagt ggcccgaagc ctctggttcg
2521 agccaaggga gcccagggcg ctgcccccgg tggaggtgag gctaggctgg gccagcaggg
2581 cagcgttccc gcccctctgg ccctccccag tgacccccag ctccaccaga atgaggacga
2641 gtgtgccgtg tgtcgggacg gcggggagct catctgctgt gacggctgcc ctcgggcctt
2701 ccacctggcc tgcctgtccc ctccgctccg ggagatcccc agtgggacct ggaggtgctc
2761 cagctgcctg caggcaacag tccaggaggt gcagccccgg gcagaggagc cccggcccca
2821 ggagccaccc gtggagaccc cgctcccccc ggggcttagg tcggcgggag aggaggtaag
2881 aggtccacct ggggaacccc tagccggcat ggacacgact cttgtctaca agcacctgcc
2941 ggctccgcct tctgcagccc cgctgccagg gctggactcc tcggccctgc accccctact
3001 gtgtgtgggt cctgagggtc agcagaacct ggctcctggt gcgcgttgcg gggtgtgcgg
3061 agatggtacg gacgtgctgc ggtgtactca ctgcgccgct gccttccact ggcgctgcca
3121 cttcccagcc ggcacctccc ggcccgggac gggcctgcgc tgcagatcct gctcaggaga
3181 cgtgacccca gcccctgtgg agggggtgct ggcccccagc cccgcccgcc tggcccctgg
3241 gcctgccaag gatgacactg ccagtcacga gcccgctctg cacagggatg acctggagtc
3301 ccttctgagc gagcacacct tcgatggcat cctgcagtgg gccatccaga gcatggcccg
3361 tccggcggcc cccttcccct cctgacccca gatggccggg acatgcagct ctgatgagag
3421 agtgctgaga aggacacctc cttcctcagt cctggaagcc ggccggctgg gatcaagaag
3481 gggacagcgc cacctcttgt cagtgctcgg ctgtaaacag ctctgtgttt ctggggacac
3541 cagccatcat gtgcctggaa attaaaccct gccccacttc tctactctgg aagtccccgg
3601 gagcctctcc ttgcctggtg acctactaaa aatataaaaa ttagctgggt gtggtggtgg
3661 gtgcctgtaa tcccagctac atgggagcct gaggcatgag aatcacttga actcgggagg
3721 tggaggttgc agtgagctga gattgcgcca ctgcactcca gtctggtcgg caagagtgag
3781 actccgtctc aaaaacaaaa caaaacaaaa aaaccacata acataaattt atcatctcga
3841 ccacttttca gttcagtggc attcacatct catgtaacca ttgccaccac catctgcaga
3901 gctgttccag cttcctgaat ggaaactctg gccccatgaa acactcactc cccattcccc
3961 tcccaacccc tggcaccctc cactctactt tctgtctcta tgacttctcc agggacctca
4021 tggaagtgga atcacacagt atctgtcctt ttgtgtctgt cttattttac tcagcatggt
4081 ggccccaagg ttcatccatg ttgtagcatg tgctgaaatc tgcttccttt tttaaggctg
4141 agtaatattc cagcacatgg atggactgca ttgtgttcat ctatgctttc ctcagcagac
4201 acctgggtgc ttccaccttt tggctgttgt gagtaatgct gctatgaata tgtgtgtgca
4261 aatatctgtg tgagtctttg agtaaaatcg ctggatcaca tggtaaaaaa aaaaaaaaaa
4321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4381 aaaaaaaaaa aaaaaaaa
//