LOCUS BC141821 2281 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens rhotekin 2, mRNA (cDNA clone IMAGE:40148149), complete
cds.
ACCESSION BC141821
VERSION BC141821.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2281)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2281)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: h Column: 22
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2281
/db_xref="H-InvDB:HIT000435176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40148149"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..2281
/gene="RTKN2"
/gene_synonym="bA531F24.1"
/db_xref="GeneID:219790"
/db_xref="HGNC:HGNC:19364"
CDS 254..745
/gene="RTKN2"
/gene_synonym="bA531F24.1"
/codon_start=1
/product="RTKN2 protein"
/protein_id="AAI41822.1"
/db_xref="GeneID:219790"
/db_xref="HGNC:HGNC:19364"
/translation="MEGPSLRGPALRLAGLPTQQDCNIQEKIDLEIRMREGIWKLLSL
STQKDQVLHAVKNLMVCNARLMAYTSELQKLEEQIANQTGRCDVKFESKERTACKGKI
AISDIRIPLMWKDSDHFSNKERSRRYAIFCLFKMGANVFDTDVVNVDKTITDICFENV
TIL"
BASE COUNT 732 a 387 c 429 g 733 t
ORIGIN
1 caccgccgcc ctctcccccg ccccgccgcg ctagagcctg gggtctcggc aacttccggc
61 ggcgggagct gcagagcgca aggcccgccc actgcgcgtg cgcttcggcc cggctcctcc
121 tgcgcccccg gcccctgcga ctgggacttg gtacggccgg gcggttggcg tcctctgcgg
181 ctcctgccag gggcgggctt ttcaaatctt ccctttgaag gagtggcgac ggcccggaca
241 gttcgcgttg gagatggagg ggccgagcct gaggggtcct gcgctccgcc tggcggggct
301 tcccacccag caggactgca acattcaaga aaaaatagac ttagaaattc gaatgcgaga
361 aggaatatgg aaactccttt ctctgagcac tcagaaagat caagttttac atgcagttaa
421 gaatctcatg gtgtgcaatg ctcgactaat ggcctataca tcggagctac agaaattaga
481 agaacagatt gcaaatcaga ctggaagatg tgatgtgaaa tttgaaagta aagaacgaac
541 agcatgtaaa ggaaagattg ccatatcaga tattcgaata ccactaatgt ggaaagactc
601 tgatcacttc agcaataaag aacgatcacg acgctatgcc attttttgtt tattcaaaat
661 gggagctaat gtgtttgata ctgatgtggt gaatgtggat aaaacaatca cagatatatg
721 ttttgaaaat gtaaccatat tgtaagtatt ttttaatctt cagagaataa aaataattta
781 aaattcttct tttttaaaag aaagttctta ttattggttc tttggattca ttttatgttt
841 aaatgtttaa gtgatcttta aatgtttaat atgattttaa aaattatttt gttcagaaga
901 agtccatttc tctatctgca gttttctgat gtgaaataaa aatggaaatc ttgtaattac
961 tattagcagt aaatatttga cttattagat atgacccatt tttaaattgt taataaatat
1021 agttcagtta ttaacaaagc tatgcataca acagaatatc ctgtaatgtt atttgatata
1081 gagagaattt aagcataaaa caggattttt atctcatgta ggatatttgg ttgcagaaat
1141 actaaaatag tatagcaact ttatttacaa gatagtcctg aagtacatgc tatataggaa
1201 gagcactttg aaattttggg gtgttctttt tcttatggtg cacttctttc atgtacttca
1261 aagcaataaa aaaaaatggg tgatctcagg gctgttttta ttgtccctgc tcttttacag
1321 gctcatttta ttgtggtcat aatacagaac aagaaggaac tccttgggta gccatagaaa
1381 tcatttttaa ctaacatagt ttttcctgcc ctccttcaaa ggttctatgt gcctaaatca
1441 gtgtgggatt tgtattttag acttttaaag acacgatctt tagatctaaa tgttaatagc
1501 tactaactat taatataaaa atccatgtgc atggtttttg ccattttcag ctatggagct
1561 agacaggtga gattttagag gcctagtttt gccactcaca taacattaaa aaaacctata
1621 acaaaccata ttttgtagct tctggtccag tgtctcatag taatagtata gcctggaaaa
1681 ataaaatgca ttgttctgag ttataagtag taattcaggc cttcttacaa gctgtattga
1741 accaaaggaa tttatttagg atccaaaaca tatccccaaa tgcttatata attgaggcta
1801 aaaaaattac ttttttcttg gttatctgaa tacatttatt tccattatca actattgcta
1861 gtgaactttt ttttctgcca aaattaccag ttgatgggcc cttttcttca catcattttg
1921 ctattgtttg ttttgatcat ggagacaaaa atcagacttt tttttccagg gaaagaacaa
1981 tagaagttac tgaggaagac aacacatgat ttataatttt ttgagaattc tgtaaatatt
2041 ttaaattgta ctaaaaataa ctgctgacaa atgttctaca tgttgaaaaa tgtgcttttt
2101 gttatgatga ttgtttttaa taagtattca atatttatga atctctggtt tttctctaaa
2161 tattgacatt tgttagtcat taccaggaat actgcatgtt taaaagttgc caaataataa
2221 actataaaaa tagctggaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 a
//