LOCUS BC141813 1663 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens phosphatidylinositol transfer protein,
membrane-associated 2, mRNA (cDNA clone IMAGE:40147891), complete
cds.
ACCESSION BC141813
VERSION BC141813.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: e Column: 15
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1663
/db_xref="H-InvDB:HIT000435168"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147891"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..1663
/gene="PITPNM2"
/gene_synonym="NIR3"
/gene_synonym="RDGB2"
/gene_synonym="RDGBA2"
/db_xref="GeneID:57605"
/db_xref="HGNC:HGNC:21044"
/db_xref="MIM:608920"
CDS 241..1563
/gene="PITPNM2"
/gene_synonym="NIR3"
/gene_synonym="RDGB2"
/gene_synonym="RDGBA2"
/codon_start=1
/product="PITPNM2 protein"
/protein_id="AAI41814.1"
/db_xref="GeneID:57605"
/db_xref="HGNC:HGNC:21044"
/db_xref="MIM:608920"
/translation="MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILE
NRPYTDGPGGSGQYTHKVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRTRFTCP
FVEKFSIDIETFYKTDAGENPDVFNLSPVEKNQLTIDFIDIVKDPVPHNEYKTEEDPK
LFQSTKTQRGPLSENWIEEYKKQVFPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRR
VMVRAHRQAWCWQDEWYGLSMENIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAV
SDQTSGEPPEPSSSNGEPLVGRGLKKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIA
RDSDESSDDEFFDAHEDLSDTEEMFPKDITKWSSNDLMDKIESPEPEDTQDGLYRQGA
PEFRVASSVEQLNIIEIKNKIFTLCPACLLSLKIKRRKGRKRQSSRQK"
BASE COUNT 441 a 430 c 477 g 315 t
ORIGIN
1 gagacagtgt acagagcttg gaattctctg aggggttcct gagatggcgc cattcaagcc
61 agggggttga atagcttgac tcttcatttc agcagcacga ttgacccctc agtggatcag
121 cagcgattca ttccacacgt atttagggtc cttggtgaat tttgtcatgg ttatttaagg
181 aaccttgcct agaagtccca acttgcagtt ccccatcgac gggaaggctt ggactccaag
241 atgattataa aggaatatcg gattcctctg ccaatgaccg tggaggagta ccgcatcgcc
301 cagctgtaca tgatacagaa gaagagccgt aacgagacat atggcgaagg cagcggcgtg
361 gagatcctgg agaaccggcc gtacacagat ggcccaggcg gctctgggca gtacacacac
421 aaggtgtatc atgtgggcat gcacattccc agctggttcc gctccatcct gcccaaggca
481 gccctgcggg tggtggagga gtcttggaat gcctacccct acacccgaac caggttcacc
541 tgtcctttcg tggagaaatt ctccatcgac attgaaacct tttataaaac tgatgctgga
601 gaaaaccccg acgtgttcaa cctctctcct gtggaaaaga accagctgac aatcgacttc
661 atcgacattg tcaaagaccc tgtgccccac aacgagtata agacagaaga ggaccccaag
721 ctgttccagt caaccaagac ccagcggggg cccctgtccg agaactggat cgaggagtac
781 aagaagcagg tcttccccat catgtgcgca tacaagctct gcaaggtgga gttccgctac
841 tggggcatgc agtccaagat cgagaggttc atccacgaca ccggactacg gagggtgatg
901 gtgcgggctc accggcaggc ctggtgctgg caggacgagt ggtatgggct gagcatggag
961 aacatccggg agctggagaa ggaggcacag ctcatgcttt cccgtaagat ggcccagttc
1021 aatgaggatg gtgaggaggc cactgagctc gtcaagcacg aagccgtctc ggaccagacc
1081 tctggggagc ccccggagcc cagcagcagc aatggggagc ccctagtggg gcgcggcctc
1141 aagaaacagt ggtccacatc ctccaagtcg tctcggtcgt ccaagcgggg agcgagtcct
1201 tcccgccaca gcatctcaga gtggaggatg cagagtattg ccagggactc ggatgagagc
1261 tcagatgatg agttcttcga tgcgcacgag gacctgtccg acacagagga aatgttcccc
1321 aaggacatca ccaagtggag ctccaatgac ctcatggaca agatcgagag cccagagccg
1381 gaagacacac aagatggtct gtaccgccag ggtgcccctg agttcagggt ggcctccagt
1441 gtggagcagc tgaacatcat agagatcaaa aataagatct tcaccttgtg cccagcctgt
1501 ctgctgtccc tgaagataaa aagacgaaaa gggaggaagc gacagtcgtc taggcagaag
1561 tgatgtggcc gtggccgaca agatggcccc gcgggaggca ggcggagctc agtgtgtcca
1621 ataaaactgt cttggtaaaa aaaaaaaaaa aaaaaaaaaa aaa
//