LOCUS BC141809 1830 bp mRNA linear HUM 27-JUN-2007
DEFINITION Homo sapiens chromosome 9 open reading frame 117, mRNA (cDNA clone
MGC:164808 IMAGE:40147564), complete cds.
ACCESSION BC141809
VERSION BC141809.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1830)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1830)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..1830
/db_xref="H-InvDB:HIT000435164"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164808 IMAGE:40147564"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..1830
/gene="C9orf117"
/gene_synonym="RP11-56D16.5"
/db_xref="GeneID:286207"
/db_xref="HGNC:HGNC:27843"
CDS 14..1291
/gene="C9orf117"
/gene_synonym="RP11-56D16.5"
/codon_start=1
/product="C9orf117 protein"
/protein_id="AAI41810.1"
/db_xref="GeneID:286207"
/db_xref="HGNC:HGNC:27843"
/translation="MAPKKSVSKAGKELEVKKKGGKKEPVVAVEPPLAKEMKEFYHIQ
IRDLEDRLARYQRKWDELAVQEKMFRQEFEQLANNKKEIVAFLKRTLNQQVDEITDLN
EQLQNLQLAKEMEKDAFEAQLAQVRHEFQETKDQLTTENIILGGKLAALEEFRLQKEE
VTDKFTLLEEQVRKQENEFRDYAYNLEKKSVLDKDRLRKEIIQRVNLVANEFHKVTTN
RMWETTKRAIKENNGITLQMARVSQQGMKLLQENEQLKGRQNNLCKQLELLENTQKVM
ARHKRGHQKIILMLTKKCQEQQQDTKEAEELRLLLSQLEQRSLQLQVDNQALKSQRDQ
LSLQLEQQQVDLQRLQQELANEQKVRASLEAALVQATSFLQNILQTGKTSWKWALRLE
FPGRGWVLGPLWACCHPTLTNRCTAMKRTVTLT"
BASE COUNT 512 a 490 c 548 g 280 t
ORIGIN
1 gttgccatca gccatggctc ccaaaaagag tgtgagcaag gcaggcaagg agcttgaagt
61 caagaagaaa gggggcaaga aggagccggt ggtggccgtg gagccgcctc tggccaagga
121 gatgaaggag ttctaccaca tccagatccg agacctggag gaccggctag cccggtacca
181 gcggaagtgg gatgagctgg ctgtgcagga gaagatgttc cgccaggagt ttgagcagct
241 ggccaataac aagaaggaga ttgtggcctt cctcaagcgc acgctcaacc agcaggtgga
301 tgagatcaca gacctcaacg agcagctcca gaacttgcag ctagccaaag agatggagaa
361 ggatgccttc gaggcgcagc tggcccaggt gcgccacgag ttccaggaga ccaaggacca
421 gctcaccacg gagaacatca tccttggggg gaagctggca gccctggagg agttccggct
481 gcagaaagag gaggtcacgg acaagttcac attgctggag gagcaggtgc ggaagcagga
541 gaatgagttc agggactatg catacaacct ggagaagaag tcggtgctgg acaaggacag
601 actgaggaaa gagatcatcc agcgcgtgaa cctcgtggcc aatgagttcc acaaggtgac
661 cacgaaccgg atgtgggaga caaccaagcg ggccatcaaa gagaacaacg gcattaccct
721 gcagatggcc agggtctccc agcaaggcat gaagctgctg caggagaatg agcagctcaa
781 gggaagacag aacaatctgt gcaaacagct ggagctgctg gagaacaccc agaaggtcat
841 ggccaggcac aaaagaggcc accagaagat catcctcatg ctgactaaga agtgccagga
901 gcagcagcag gacaccaagg aggccgagga gctgcgcctc ctgctgagcc agttggagca
961 gagatccctg cagctgcagg tggataacca ggcactgaag agccagagag accagctgag
1021 cctgcagctg gagcagcagc aggtggattt gcagcggcta cagcaggaac tggctaatga
1081 gcagaaggtt cgggccagcc tggaggcggc tctggtccag gccacctcct tcctacagaa
1141 cattctgcag acagggaaaa cttcgtggaa atgggcactg aggttggaat ttcctggacg
1201 agggtgggta ctggggccac tgtgggcctg ctgccacccc accctcacca acagatgcac
1261 cgcgatgaag aggacagtga cgttgacgtg acgttccagc catggcacaa ggagatgctg
1321 cagcaactgc tggtcatgct cagctccact gtggccacga gacctcagaa ggctgcgtgt
1381 ccccaccagg agtcacagtc ccatggccca cccaaggaga gccggcccag catccagctg
1441 cccaggactg ggtctctgct gccgcagctc tctgacatca ccccctacca gccgggggat
1501 ctaggcctgg tacctcgcca ggtccacatc ccacccaacc cccaggacct caggctgctg
1561 tcatatatca cccgtgtggg gaccttccgg gcacacagca gccctgagat gcgtgcccct
1621 ggttctctaa aaaggcttga aaagtttagt cttcctgaag ttcccctacg tcccaagtag
1681 gacacagaga gaagaaccta ctccagaaat ggactggtcc agtcacagtc acccccactt
1741 taatccgcag gcagcctgga acagtctaga ggagatttgt ataaaaagta gataccaaga
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//