LOCUS BC141807 1741 bp mRNA linear HUM 08-MAY-2007 DEFINITION Homo sapiens tripartite motif-containing 54, mRNA (cDNA clone MGC:164792 IMAGE:40147443), complete cds. ACCESSION BC141807 VERSION BC141807.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1741) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1741) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-MAY-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Novartis Institute for Biomedical Research cDNA Library Preparation: Novartis Institute for Biomedical Research cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 306 Row: c Column: 11. FEATURES Location/Qualifiers source 1..1741 /db_xref="H-InvDB:HIT000435162" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:164792 IMAGE:40147443" /tissue_type="Donated clones,Novartis FGA collection" /clone_lib="NIH_MGC_417" /lab_host="DH5a" /note="Vector: pCMV-SPORT6" gene 1..1741 /gene="TRIM54" /gene_synonym="MURF" /gene_synonym="MURF-3" /db_xref="GeneID:57159" /db_xref="HGNC:HGNC:16008" /db_xref="MIM:606474" CDS 76..1152 /gene="TRIM54" /gene_synonym="MURF" /gene_synonym="MURF-3" /codon_start=1 /product="tripartite motif-containing 54" /protein_id="AAI41808.1" /db_xref="GeneID:57159" /db_xref="HGNC:HGNC:16008" /db_xref="MIM:606474" /translation="MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQH NLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVE NIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEV APLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFE SLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQM ALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASG EEEEVAPDGEEGSAGPEEERPDGP" BASE COUNT 410 a 503 c 543 g 285 t ORIGIN 1 ctaagcgagg aagggtctac aggcagtgag tgaaggccag gagcagggcc caggccaggc 61 acgaccaccg aggggatgaa cttcacagtg ggtttcaagc cgctgctagg ggatgcacac 121 agcatggaca acctggagaa gcagctcatc tgccccatct gcctggagat gttctccaaa 181 ccagtggtga tcctgccctg ccaacacaac ctgtgccgca aatgtgccaa cgacgtcttc 241 caggcctcga atcctctatg gcagtcccgg ggctccacca ctgtgtcttc aggaggccgt 301 ttccgctgcc catcgtgcag gcatgaggtt gtcctggaca gacacggtgt ctacggcctg 361 cagcgaaacc tgctagtgga gaacattatc gacatttaca agcaggagtc atccaggccg 421 ctgcactcca aggctgagca gcacctcatg tgcgaggagc atgaagaaga gaagatcaat 481 atttactgcc tgagctgtga ggtgcccacc tgctctctct gcaaggtctt cggtgcccac 541 aaggactgtg aggtggcccc actgcccacc atttacaaac gccagaagag tgagctcagc 601 gatggcatcg cgatgctggt ggcaggcaat gaccgcgtgc aagcagtgat cacacagatg 661 gaggaggtgt gccagactat cgaggacaat agccggaggc agaagcagtt gttaaaccag 721 aggtttgaga gcctgtgcgc agtgctggag gagcgcaagg gtgagctgct gcaggcgctg 781 gcccgggagc aagaggagaa gctgcagcgc gtccgcggcc tcatccgtca gtatggcgac 841 cacctggagg cctcctctaa gctggtggag tctgccatcc agtccatgga agagccacaa 901 atggcgctgt atctccagca ggccaaggag ctgatcaata aggtcggggc catgtcgaag 961 gtggagctgg cagggcggcc ggagccaggc tatgagagca tggagcaatt caccgtaagg 1021 gtggagcacg tggccgaaat gctgcggacc atcgacttcc agccaggcgc ttccggggag 1081 gaagaggagg tggccccaga cggagaggag ggcagcgcgg ggccggagga agagcggccg 1141 gatgggcctt aaggcctgcg ccgacccgac cctgctcgag agcccgcgct agagtcgggg 1201 aggatctgcg cagagaccgc agcatcaccc aaatcggcgc cggccccggg aggatctcaa 1261 taaagaactc gagcgtccca gacccgtatc tcctttcgct gcccaacccc gcagcctggg 1321 cttcgaaggc gacccgccca ccatcctgcc cttcccagaa cctgagaccg tctggggggc 1381 ggaagccaaa tgaaccccta ttgggcacct ctgtgatgcc aggagcgaac tggtgagccc 1441 agcgccctgg gaagagggcc gagggcgggg cggtggtgcc gggacctctg aggtcctggg 1501 gatttgggga cccttggggt ccacatgcac ctggctgacc tggctgaaag ccgctgtctc 1561 ggagcccccc acagcatttt gttcccctcc cgctggcccg ggggccccac cttcccacgg 1621 gttcccacgc tgctgtgact gccctgcctc tacgacaaaa gccaacgggt cttcagtact 1681 tttattaaaa aatagtcacg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1741 a //