LOCUS BC140890 4781 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens zinc finger and BTB domain containing 39, mRNA (cDNA clone MGC:176567 IMAGE:9021758), complete cds. ACCESSION BC140890 VERSION BC140890.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4781) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4781) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 673 Row: p Column: 12. FEATURES Location/Qualifiers source 1..4781 /db_xref="H-InvDB:HIT000501630" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:176567 IMAGE:9021758" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_313" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: CCGCCCCC" gene 1..4781 /gene="ZBTB39" /db_xref="GeneID:9880" /db_xref="HGNC:HGNC:29014" CDS 57..2195 /gene="ZBTB39" /codon_start=1 /product="zinc finger and BTB domain containing 39" /protein_id="AAI40891.1" /db_xref="GeneID:9880" /db_xref="HGNC:HGNC:29014" /translation="MGMRIKLQSTNHPNNLLKELNKCRLSETMCDVTIVVGSRSFPAH KAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKVLSFVYTSELFTDLINVGVI YEVAERLGMEDLLQACHSTFPDLESTARAKPLTSTSESHSGTLSCPSAEPAHPLGELR GGGDYLGADRNYVLPSDAGGSYKEEEKNVASDANHSLHLPQPPPPPPKTEDHDTPAPF TSIPSMMTQPLLGTVSTGIQTSTSSCQPYKVQSNGDFSKNSFLTPDNAVDITTGTNSC LSNSEHSKDPGFGQMDELQLEDLGDDDLQFEDPAEDIGTTEEVIELSDDSEDELAFGE NDNRENKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVL SHIGIFLFSCDMCETKFFTQWQLTLHRRDGIFENNIIVHPNDPLPGKLGLFSGAASPE LKCAACGKVLAKDFHVVRGHILDHLNLKGQACSVCDQRHLNLCSLMWHTLSHLGISVF SCSVCANSFVDWHLLEKHMAVHQSLEDALFHCRLCSQSFKSEAAYRYHVSQHKCNSGL DARPGFGLQHPALQKRKLPAEEFLGEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHR RIHTGEKPYQCKVCHKFFRGRSTIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGV HKGSLPPDFTIEQTFMYIIHSKEADKNPDS" BASE COUNT 1149 a 1227 c 1226 g 1179 t ORIGIN 1 ccgcagagcc ggattaactg tgctgataag gaggtaattt cataggagct gctaagatgg 61 gcatgaggat caaactgcaa agcaccaacc accccaacaa cctgctgaag gaactcaaca 121 agtgccggct ctcagagacc atgtgcgacg tcaccattgt ggtggggagc cgctccttcc 181 cggcccacaa ggctgtgctg gcctgtgcag ctggctactt ccagaacctc ttcctgaata 241 ctgggcttga tgctgccagg acctatgtgg tggacttcat cacccctgcc aactttgaga 301 aggttctgag ctttgtctac acttcagaac tcttcacaga cctgatcaat gttggggtca 361 tctacgaggt agctgagcgt ctgggtatgg aggacctcct ccaggcctgt cactctacct 421 ttcctgatct ggagagcact gccagggcca agcccctgac cagcaccagt gagagccact 481 ctggtaccct gagttgtcct tcggcagaac ctgcccatcc ccttggagaa ctccgaggtg 541 gtggggacta ccttggtgct gatagaaact atgtgttgcc cagtgatgct ggagggagct 601 ataaagagga agagaagaat gttgccagtg acgctaacca tagcctgcat ctgccgcaac 661 cgcccccacc accgccaaag acagaagacc atgacacccc tgctcccttc acgtccattc 721 ctagcatgat gacccagcca ctcctaggca ctgtcagcac gggcatccag accagcacga 781 gctcctgcca gccatacaaa gttcaaagca atggagactt cagtaaaaac agcttcctca 841 cccctgacaa tgcagtagac attaccactg ggaccaactc ctgtctgagc aatagtgagc 901 actccaaaga tcctggcttt gggcagatgg atgagctcca gctcgaggac ctgggggatg 961 atgacttgca gtttgaagac cctgctgagg atataggcac aactgaggag gtgattgagc 1021 tgagtgatga cagtgaggat gagttggctt ttggagagaa tgacaatcgg gagaataagg 1081 ccatgccctg ccaggtgtgc aagaaagttc tagagcccaa cattcaactg atccggcagc 1141 atgctcggga ccatgtggac ctgctgacgg gcaactgcaa ggtctgcgag acccacttcc 1201 aggaccgaaa ctcccgggta actcatgtcc tgtcccacat tggtattttc cttttctcct 1261 gcgacatgtg tgaaactaag ttctttaccc agtggcagct gacccttcac cgacgggatg 1321 gaatatttga gaacaacatc attgtccacc ccaacgatcc cctgccaggg aagctgggtc 1381 tcttttcagg ggcagcctcc ccagagctga aatgcgctgc ctgtgggaaa gtattggcca 1441 aagatttcca tgtggtccgg ggccacatcc ttgaccatct aaacttgaag ggccaggcct 1501 gcagtgtctg cgaccagcgt caccttaacc tctgcagcct catgtggcac acgctgtccc 1561 atctcggcat ctcagtcttc tcctgttctg tctgtgcgaa cagctttgtg gactggcatc 1621 ttctagagaa gcacatggct gtgcaccaaa gtctggaaga cgccctcttc cactgccgct 1681 tgtgcagcca gagcttcaag tcagaggctg cctatcgcta ccacgtcagc cagcacaaat 1741 gcaacagtgg ccttgatgca cggcctggtt ttgggctgca gcacccagct ctccagaagc 1801 ggaagctgcc agcagaggag tttctgggtg aagagctggc gctgcagggc caacctggga 1861 acagcaagta tagctgcaag gtctgtggca aaagatttgc ccacacaagc gaattcaact 1921 accaccggcg gatccacacg ggggagaagc cataccaatg taaggtgtgc cacaagttct 1981 ttcgaggccg ctcgaccatc aagtgccacc taaagacaca ctcgggggcc ctcatgtacc 2041 gctgcacagt ctgtgggcac tacagttcca cccttaacct catgagcaaa catgttggtg 2101 tgcacaaagg cagcctcccc cctgacttca ccatcgagca gaccttcatg tacatcatcc 2161 attccaaaga ggcggataag aacccggaca gttgactggg tcccggcaga gccacgggga 2221 gctcccaagc agcagccagg atgctgatat ctaagaggtg ttggtccctc cccagctgaa 2281 gttataattt tgccttggta ggaattctgt tctgtgttgt gtttaaagaa gaaaagaaga 2341 agaaatagca cataagctgt tactgttgtt gagaagcaac agccctatca catttacctc 2401 catacctgtt cttgcccatg cagggctatg tttttcattc ttttgaggct ggttttggga 2461 tctagtcaag cagttggtgt ccactagacc cccttcccca gcctctctag ttttagttta 2521 ctgataggtt ttatgctgct aagaatccaa ccaacagcct cacttaacag aggaggtaaa 2581 gggaggtttt cactgtgggt gttactgcag gcctccaact gggatgacca gcaatgagaa 2641 agattttggg aatgtgatca ttcagaaaag acaggtcagc agggcagtcc cctcaggttc 2701 cagccctcag cagggacaag acatcaggga tgttggtgtc tgcttatcta cagccctaat 2761 ctgctgattg aacagtgaaa atcttttggc agctagatcc atactaggca cagagctttc 2821 tatttaggtc agaaagcttt gggatgaacc cctgccagcc agaaggggtg tcctgcagtg 2881 ccaccagaag tggcagcctg gatggacagg agaggtttct cttttctcct catttccaaa 2941 gaaacaggat tttatggagt gatggcccgg gacgtccggc cttctgtggg gcagagagga 3001 tagggaacca ctttgatata gtcatctgtt ttggccactt ctgttggcca tgagtgtctt 3061 ggtggagagg tggggatgta tctgacagca gcagccttgc cttaatttat atctggtctc 3121 ccgtccagaa gtgtttggcc cgtggtgtag atgagctgac tccatgaagt ggtggagtgg 3181 cagaccgcga gcccttcagg attaaaggga cctgagtaac tggtggtgtg tagcagggtg 3241 tgcgttctga ctgtctgtcc tagtcgggta acctgtttac tttgtgctaa cagtgccgga 3301 gctttgtcag ctcacctttg acctgctgga atttatcctg atctgtcgtt gccatcacct 3361 ccagggggcg ctattggatg gcagctggtt caggccctcc gtgggtggct gcagagtgtg 3421 ccggcacagc ccacgcagct ggttagctcc actcttactt ggttttctaa ggggctttgc 3481 ccaaagaagt cttgagggat agggccctcg atcttgcata cttgtgaggt gccacctcag 3541 tagctcatac tacctcaccc tgctcaggtg agctctggga gtccctggcc tcagccctgg 3601 cactgcccct ggtgggattc agcaacaccc cgggctgttt cacaagcaag tggttttcat 3661 taactcacaa agcctttttg gacattaata tttatttatt tttgtttttg tatacacatt 3721 acccagcatc tcttttgtat aagagacttt aggaaaatga gtttctcccc agcaagtagc 3781 catattccag agaacagcct tgaccagaga tgtggagaac caggggtata actaagggaa 3841 gacatgtcaa gcccttaagc aaattcttct tctccagatt gtctctagca taataaaccc 3901 agggaacact ttaggccatg ggtgtatgtt ctataaagtt cgggacagtt aaattccagg 3961 cctttcatcc cccttccttc ctgtgatgga gtagattggg gacagggttg aggggaacaa 4021 gtgacatgaa tgacctattt gcacagtttg gaagcctcct gtctttattt atattgagat 4081 gtcagacaaa ccaaagctcc atccttgttg gacctgctgc ttgtccccag ccctgaactg 4141 ataaagcctc agagttggag tgcctggctc tctggtgggg tgaccattag atgaagggac 4201 ttgtacagtg gccagtttaa aggtccacct ttgaccatct aaacccacct tgttcagtgt 4261 cctctgagga catcctcatc aggaaagcag tgttgagact cttcattgct gactggcttc 4321 tccctttctt actcacactg accattagaa tttaagaagg aaatgtgtaa cagactacag 4381 tcaagtgtct gctacatttt caagcatgag caatccctcc cagactgttg gtgaggactg 4441 atttttgaaa tgctggtgtg agagaggtgg taattacagg aaccagccga gtggctgaga 4501 gcagataaat gtgctggaga aacctttttc cttaacagag ggcatcatgg atgctgggtg 4561 gtctgtgtac ttaacctgaa actgtgaagt tttccctttt tgccagtaaa ccaaaaagca 4621 gatccttgaa acttggccct tgaaacacga aacagaaaac tgcatcccct gatcccccgg 4681 gggctgatca gattgatcag ggtggctcag ttggtcccag tcagatacgt cataggatca 4741 gtagctcatg agatttgttg accaaaccct ctccctgttg g //