LOCUS BC140879 1831 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens F-box protein 47, mRNA (cDNA clone MGC:176556
IMAGE:9021747), complete cds.
ACCESSION BC140879
VERSION BC140879.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1831)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1831)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: p Column: 1.
FEATURES Location/Qualifiers
source 1..1831
/db_xref="H-InvDB:HIT000501620"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176556 IMAGE:9021747"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCTCCATA"
gene 1..1831
/gene="FBXO47"
/db_xref="GeneID:494188"
/db_xref="HGNC:HGNC:31969"
/db_xref="MIM:609498"
CDS 171..1529
/gene="FBXO47"
/codon_start=1
/product="F-box protein 47"
/protein_id="AAI40880.1"
/db_xref="GeneID:494188"
/db_xref="HGNC:HGNC:31969"
/db_xref="MIM:609498"
/translation="MASRINTNFTLIPNQKLRRSNRQTSCYSKTLGSGFQPISTFGNF
KALPLEIFQIILKYLSVKDISMLSMVSKTVSQHIINYISTSSGSKRLLLQDFHNLELP
DRRQDSAILEHYRSLGLLFKRCTLLLPTKERLKYIHKILTEVSCFKFNGCAAPMQCLG
LTCYGMFLQTLTAGWDELECHRVYNFLCELTNLCRKIQMAVCSKPGSARKLELRIRLF
CRNVLLDHWTHRSDSAFWLTRILKPWPMVNQARLLYIIFGPISPQDGQVVWQEMIEEP
TDEFSLKGLADAIKLLYDASTKEWTADDVISLVDELSVVPREWLLENNARLLMLSGNN
ICFSFMASKAVNGRTIELARLVVFLALVCEKELYCMDWTVKMMQKVCKVFSTPVERKN
FLQNVANAFACVIMEMLQSIMSGDRDEDDRSFLNLFHLVHAQANFHKEVLYLTMNTPL
ST"
BASE COUNT 575 a 365 c 377 g 514 t
ORIGIN
1 gtgtgaccct ctcgcctcct ggcgggaagc tcttgaggag atattttctt ttctaaacac
61 taagaaattt gaggatggtg gggcaaaacg actaactccc actttcctgt gactctgtag
121 ccggaaaaac tgtcaaaatc tgtggataaa tttgtgagac aagaagaaga atggcatcca
181 gaataaatac aaatttcact ttgattccca accagaaact tagacgtagt aatcgtcaaa
241 ccagctgtta ttccaagacc cttggctcag gctttcaacc catatcaaca tttggaaatt
301 ttaaagcctt accattggaa atattccaga taattttaaa atatttgtca gtgaaggata
361 tcagcatgct aagcatggtg tccaaaacag tcagccaaca cattattaat tatatctcaa
421 cctcatcagg aagcaaaaga cttttactac aggactttca taaccttgag ctgcctgaca
481 ggagacaaga ctctgctata ctggagcact acagatctct aggtctactg tttaaaagat
541 gcacattgct gctacccacc aaggaaaggc taaaatacat tcacaagata ctcacagaag
601 tttcctgctt taaattcaat ggctgtgcag ctcctatgca gtgtttagga ttaacatgtt
661 atggcatgtt tttacagacc ttaacagcag gttgggatga acttgagtgc catcgcgttt
721 ataatttctt atgcgaactg actaatctct gccgcaagat acaaatggct gtctgcagca
781 aaccaggaag tgcccgaaaa ctggagttaa gaatcagact cttctgtagg aatgtcctcc
841 ttgatcattg gacacatcga agtgattctg ctttttggtt gacgcgaata ttaaaaccat
901 ggccaatggt gaatcaggca agattactgt atatcatctt tgggccaata tctcctcaag
961 atggacaggt ggtttggcag gaaatgatag aagaacctac agatgaattc agtctgaaag
1021 gtttggctga tgccattaag ttactatatg acgctagcac taaagagtgg acagcagatg
1081 atgttatcag tcttgtagat gaactatcag tggttccccg tgagtggctt ctagagaata
1141 atgcacgtct cctaatgcta agtggaaaca acatctgttt cagtttcatg gctagtaaag
1201 ctgtgaatgg acgcaccatt gaactggcaa ggctcgtagt ctttttggct ttggtgtgtg
1261 agaaagaact gtactgcatg gattggacag ttaaaatgat gcaaaaagtc tgcaaagtct
1321 ttagcactcc agtggaaaga aagaacttcc tgcagaatgt ggcaaatgca tttgcatgtg
1381 ttataatgga aatgctgcaa tcaattatgt ctggagaccg tgatgaagat gacagaagct
1441 ttttgaattt gttccatctt gtacatgctc aggctaactt ccataaggag gtcctgtatt
1501 tgaccatgaa tactcctctg tctacctaaa tcctcagaaa gccttgcctt tagagaacgt
1561 cactgaacga atgattagag gagtgctact ttttcactca aaaaatagca tccatgggac
1621 tttttatcat ctaagtaacc taagaattca aaagctggat agaattttag aagcaactac
1681 gtacatcatt attaatataa aaataacagg cagactcaag aatgtgctga gatttctctg
1741 gaaaacaagc tctgcctctc cgggttttag tcaacctaac accaaaccaa aatagaatgt
1801 tagctgttca agaatctggg accagccaac c
//