LOCUS BC140878 2756 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens NHL repeat containing 3, mRNA (cDNA clone MGC:176555
IMAGE:9021746), complete cds.
ACCESSION BC140878
VERSION BC140878.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2756)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2756)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: o Column: 24.
FEATURES Location/Qualifiers
source 1..2756
/db_xref="H-InvDB:HIT000501619"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176555 IMAGE:9021746"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCTCTCTA"
gene 1..2756
/gene="NHLRC3"
/db_xref="GeneID:387921"
/db_xref="HGNC:HGNC:33751"
CDS 256..1299
/gene="NHLRC3"
/codon_start=1
/product="NHL repeat containing 3"
/protein_id="AAI40879.1"
/db_xref="GeneID:387921"
/db_xref="HGNC:HGNC:33751"
/translation="MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKI
LYRLDVGWPKHPEYFTGTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNY
TVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNP
LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHS
VTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQ
LNLSRLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQK
YVPLNSYVPSFGS"
BASE COUNT 756 a 530 c 616 g 854 t
ORIGIN
1 cgaagcacct gacatgaggg cggggacccc gaaatgcaca cgaagtccgg aactggtctt
61 ctgtgatttt cattcgccct ggtctctgtt ccctttcgta ctcaaagctc gtgcatccag
121 ggaggggaaa ccggagatag ggtcttcggg ccccgggcag accctctgtg ccgctgcaaa
181 ccgttgcagc ctgaggctgt caggtcctcc cccagacacc tgcggaccct ccctctcctg
241 gcttcccgtc tggtcatggc gagattctgg gtctgcgtag ccggtgctgg cttctttctt
301 gcatttttgg ttttgcattc gcgtttttgt ggctctccag ttttgaggaa ctttactttt
361 gcagtttcct ggagaactga gaaaattctt taccggctgg atgtgggttg gcctaagcac
421 ccagaatatt ttaccggaac aacattttgt gttgcagttg actccctcaa tggattggtt
481 tacataggtc aaagagggga taacatccca aagatattag tgttcacaga ggatggatat
541 ttcctacgag cctggaatta tacagttgac acacctcatg gtatatttgc agccagtact
601 ctatatgaac aatccgtctg gatcacggat gtaggaagtg gattctttgg tcatactgtt
661 aaaaaataca gttcttttgg tgatcttgtt caagtcttgg gtactccagg caaaaaaggc
721 actagtttga atcctttgca gtttgataac ccagcagaat tatatgtaga ggacacagga
781 gatatttaca ttgtggatgg agatggagga ttgaataaca gattgatcaa actgtcccaa
841 gatttcatga tcctttggct gcatggagaa aatgggacag ggcctgctaa gttcaacata
901 cctcacagtg ttacacttga ttcagctggt cgggtgtggg ttgctgaccg aggaaataaa
961 agaatccaag tatttgataa agacactggg gagtggttag gagcatggaa taattgtttc
1021 acagaagagg gaccttcttc agtcaggttt actcctgatg ggaagtactt gattgtggcc
1081 cagctgaatc ttagcaggct ctcagtcgta gcagcacccc cagtgggaag cattggggag
1141 tgttctgtga tcagcacaat ccaactagca gatcaagttt tgccacatct cctagaagtc
1201 gacagaaaga ctggagcagt ctatgtagca gaaattggag caaaacaagt acaaaaatat
1261 gtccctttga atagctatgt tccttcattt ggttcataat gtttctttcc cgggaatatt
1321 tcaagtggca gttcagattc tcaattcact aagtgcttaa aaatgatgtt caagcacaag
1381 aatttatttt tctagtataa aagatctagt atcagaaaga tttgtttttg tatcattaag
1441 aatcttatat tttgttgccc tcttgggact tagttttatt tgtaagtgca taaggatatt
1501 ttaatgaaag gaaagtaact aaaaaatggg gttgggaaga gggactaagg tggtaacctc
1561 attatttgcc ctggtagact gattctccct gggtaaaaaa aatgggaata aaaatgagct
1621 tgcatgataa tttattaaat ttcatgtgaa gaactccaga cctccagatt gtgcaactaa
1681 cataaaatga gctgcttgag agattgtaaa taagatgaac tattgattaa tttgagtacc
1741 cacagagtgc tgtgtcttga cgacttaaaa atgaaaaagc aggattgcct tttgagtagc
1801 ttgcagtcta gtggggagac aagcaggcaa acagtcacaa cacagcaaaa gcgaccttgg
1861 agcatagtgg gacttttgga gtaggagtgc tgcatttgac tgagggaatc atggatactt
1921 cgcaggagaa gtgaatttga gctcagactt gaaaactgag gaggagctta ccaagggaca
1981 aggaggagaa aacaataatt tccaagtaaa gaaggtataa aaagttagaa gtgtactgta
2041 aactttgata ggcttttagg ccttttttaa agcccaactt ggcttctgtc cattacctat
2101 aagatattta atgtcagtca gcctttaaat gtaggaataa aatggctggc atctaagcac
2161 tttagtaaaa gaggttttta caaataacta aggattgtag agcttccttc tctttttttt
2221 tctttttctt tcttttgttt tacatgaact caacttattc ctaacatttg tctacctcaa
2281 agaaatttca agattattta gataacatgg atatgtgcca aatcctttga gctgttaaga
2341 tgataatttc ctgctttcct cctacatctt ctcctcccac tccctccttt ggtgtgaata
2401 ttggcttccc aattaagacc tttttttttt ttttccagtt tgttttagct tattataggt
2461 tttggaggaa ctttgccatt ttgtaatctt tcaaatcatt cttcaccctt cctcacatca
2521 gcttcctgct tttcccagtg ttttactgta aattgtgtag catatgacaa atcttgagct
2581 gactttcctc ttcacctgtt atggctggag tattttccag acctgaaggg actcacactt
2641 gttttgatac ttggatcaca tctccgtgag gttaggaagg taaatctacc aacaggaagc
2701 cctgtactct gtattccaag gccattggta aatgtgttgg tgccactgat cggact
//