LOCUS BC140846 3225 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens armadillo repeat containing 4, mRNA (cDNA clone
MGC:176523 IMAGE:9021714), complete cds.
ACCESSION BC140846
VERSION BC140846.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3225)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3225)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: n Column: 16.
FEATURES Location/Qualifiers
source 1..3225
/db_xref="H-InvDB:HIT000501591"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176523 IMAGE:9021714"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ATCGTCTT"
gene 1..3225
/gene="ARMC4"
/gene_synonym="DKFZP434P1735"
/gene_synonym="RP11-691I13.1"
/db_xref="GeneID:55130"
/db_xref="HGNC:HGNC:25583"
CDS 24..3158
/gene="ARMC4"
/gene_synonym="DKFZP434P1735"
/gene_synonym="RP11-691I13.1"
/codon_start=1
/product="armadillo repeat containing 4"
/protein_id="AAI40847.1"
/db_xref="GeneID:55130"
/db_xref="HGNC:HGNC:25583"
/translation="MGVALRKLTQWTAAGHGTGILEITPLNEAILKEIIVFVESFIYK
HPQEAKFVFVEPLEWNTSLAPSAFESGYVVSETTVKSEEVDKNGQPLLFLSVPQIKIR
SFGQLSRLLLIAKTGKLKEAQACVEANRDPIVKILGSDYNTMKENSIALNILGKITRD
DDPESEIKMKIAMLLKQLDLHLLNHSLKHISLEISLSPMTVKKDIELLKRFSGKGNQT
VLESIEYTSDYEFSNGCRAPPWRQIRGEICYVLVKPHDGETLCITCSAGGVFLNGGKT
DDEGDVNYERKGSIYKNLVTFLREKSPKFSENMSKLGISFSEDQQKEKDQLGKAPKKE
EAAALRKDISGSDKRSLEKNQINFWRNQMTKRWEPSLNWKTTVNYKGKGSAKEIQEDK
HTGKLEKPRPSVSHGRAQLLRKSAEKIEETVSDSSSESEEDEEPPDHRQEASADLPSE
YWQIQKLVKYLKGGNQTATVIALCSMRDFSLAQETCQLAIRDVGGLEVLINLLETDEV
KCKIGSLKILKEISHNPQIRQNIVDLGGLPIMVNILDSPHKSLKCLAAETIANVAKFK
RARRVVRQHGGITKLVALLDCAHDSTKPAQSSLYEARDVEVARCGALALWSCSKSHTN
KEAIRKAGGIPLLARLLKTSHENMLIPVVGTLQECASEENYRAAIKAERIIENLVKNL
NSENEQLQEHCAMAIYQCAEDKETRDLVRLHGGLKPLASLLNNTDNKERLAAVTGAIW
KCSISKENVTKFREYKAIETLVGLLTDQPEEVLVNVVGALGECCQERENRVIVRKCGG
IQPLVNLLVGINQALLVNVTKAVGACAVEPESMMIIDRLDGVRLLWSLLKNPHPDVKA
SAAWALCPCIKNAKDAGEMVRSFVGGLELIVNLLKSDNKEVLASVCAAITNIAKDQEN
LAVITDHGVVPLLSKLANTNNNKLRHHLAEAISRCCMWGRNRVAFGEHKAVAPLVRYL
KSNDTNVHRATAQALYQLSEDADNCITMHENGAVKLLLDMVGSPDQDLQEAAAGCISN
IRRLALATEKARYT"
BASE COUNT 1040 a 622 c 775 g 788 t
ORIGIN
1 caggtctgag cacggtggat cccatgggtg tggctctgag gaaattgacg cagtggactg
61 ctgccggaca tggaactgga atcctcgaaa tcacccctct aaatgaagcg atattgaaag
121 aaattattgt gtttgtggag agttttatct ataaacatcc tcaagaggca aaatttgttt
181 ttgtggaacc acttgaatgg aacacaagtt tggcgccctc agcatttgaa tcaggttatg
241 ttgtcagtga aacaacagtc aaatcagaag aagttgataa aaatggacag cctttgctat
301 ttctctctgt accacaaatt aaaattagga gctttgggca gctgtcacgc ttgttactta
361 ttgccaaaac tgggaagttg aaggaagccc aagcatgtgt tgaagctaac agagacccca
421 tagtaaaaat cctgggctct gattataata caatgaaaga aaactcaatt gcattaaata
481 ttcttggcaa aattaccaga gatgatgatc ctgaaagtga aattaagatg aagattgcta
541 tgctgcttaa gcaattggat ctgcacctcc tcaatcattc tctaaaacat atttcattag
601 aaataagttt aagtcccatg acggtgaaga aggatataga actgctcaaa cgtttctcag
661 gaaaaggaaa ccaaacagtc ttggaatcta ttgaatatac ctcagattat gaattttcaa
721 atggatgtcg agccccaccg tggagacaaa ttcgtgggga aatttgttat gtgctggtga
781 aacctcacga tggtgagact ctgtgcatta cttgcagtgc aggaggagta tttttaaatg
841 gtggcaaaac agatgatgaa ggggacgtta attatgagag aaaaggttca atttataaaa
901 accttgtcac atttttaaga gaaaaatcac caaaattttc agaaaatatg tctaaattgg
961 gaattagctt cagtgaagac cagcaaaagg aaaaggatca gcttggcaaa gcccccaaga
1021 aggaagaagc agctgccctc cgcaaagaca tttctggttc agacaaaagg tcactggaga
1081 agaaccaaat taatttttgg aggaatcaaa tgaccaagag atgggaacca agcttaaact
1141 ggaagaccac tgttaattac aaaggcaaag gctcagcaaa agaaatccaa gaggacaaac
1201 acacaggaaa acttgaaaaa ccaagaccat ctgtttcaca cggaagagca caattacttc
1261 ggaagagtgc tgaaaagatt gaggaaactg ttagcgatag ctcctcagaa agtgaggaag
1321 atgaagaacc acctgaccat cgtcaggaag caagtgcaga tttgccatca gaatattggc
1381 aaattcagaa gctggtgaaa tatttaaagg gaggaaatca aacagctaca gtgattgcgt
1441 tgtgttcaat gagggatttc agcttagctc aagaaacctg ccagttggcc atcagagatg
1501 ttggaggcct ggaagtgctg ataaatttgc ttgaaaccga tgaagtcaaa tgtaagattg
1561 gttcattaaa aatactgaag gaaatcagtc ataatcctca aatcagacag aatattgttg
1621 accttggggg cttaccaatt atggtgaata tacttgattc tccacacaag agtctaaaat
1681 gtttggcagc cgagactatc gcgaatgttg ccaagtttaa aagagcacgg cgggtggtga
1741 ggcagcacgg gggtatcacc aaactggttg ctctactaga ctgtgcacat gattccacaa
1801 aacctgccca atcgagtctg tatgaggcca gagacgtgga agtggctcgc tgtggggcac
1861 tggccctgtg gagctgcagt aagagtcata cgaataaaga agccatccgc aaagctgggg
1921 gcattcctct gttggctcgg ctgctgaaga cttctcatga aaacatgcta attccagtgg
1981 tggggacatt gcaagagtgt gcatcagagg aaaactaccg ggctgcaatc aaagcagaaa
2041 ggatcattga aaaccttgtc aagaacctaa atagtgagaa cgagcagctg caggagcact
2101 gcgccatggc catttaccag tgtgctgaag ataaggaaac ccgggacctc gttaggctgc
2161 acggaggact taagcccttg gccagtctac tcaataacac tgacaataaa gagcggttag
2221 ctgctgtcac aggggctata tggaaatgtt ccatcagcaa agagaatgtt accaagtttc
2281 gggaatacaa agccattgaa accttggtgg gacttctaac agatcagcct gaagaagtac
2341 ttgtgaatgt ggttggggcc ttgggagaat gctgccaaga acgtgaaaac cgagtcattg
2401 tccggaaatg tggtggcatt caaccacttg tgaacctcct tgttggaata aaccaagctc
2461 ttcttgtgaa tgttacaaaa gcagttggtg cttgtgcagt agaacctgaa agtatgatga
2521 taattgatcg cttagatgga gttcgtttgt tgtggtccct gctgaaaaat cctcacccag
2581 acgtgaaggc cagcgcagca tgggcactct gtccatgcat caaaaatgca aaggatgctg
2641 gggaaatggt tcgttccttt gttggtggtt tggaacttat tgtcaattta ctgaaatcag
2701 ataacaaaga agttctggca agtgtatgtg ctgccattac caacatagca aaagatcaag
2761 aaaatttagc tgttatcaca gatcatggag ttgttccttt attgtccaaa ctggcaaata
2821 caaataacaa taaattgaga catcatctag cagaagctat ttcacgttgc tgtatgtggg
2881 gcaggaatag agtggccttc ggtgagcaca aagcagtggc tccactagtg cgttatctga
2941 aatcaaatga caccaacgtg catcgggcga cagctcaggc cttgtaccaa ctctcagaag
3001 acgccgataa ctgcatcacc atgcatgaga atggtgcagt aaagcttcta ctggatatgg
3061 ttgggtcccc tgaccaggat ctccaggaag ctgcagctgg ttgtatatcc aatatccgca
3121 ggctggctct tgctacagag aaggcaagat acacttgaaa tttaaatgga cattacaagc
3181 tatcaaattc tacatgacac aggacatgtc actcccatgg ccaga
//