LOCUS BC140835 942 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens chromosome 10 open reading frame 78, mRNA (cDNA clone
MGC:176512 IMAGE:9021703), complete cds.
ACCESSION BC140835
VERSION BC140835.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 942)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 942)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: n Column: 5.
FEATURES Location/Qualifiers
source 1..942
/db_xref="H-InvDB:HIT000501580"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176512 IMAGE:9021703"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGCAGTTT"
gene 1..942
/gene="C10orf78"
/gene_synonym="bA373N18.1"
/gene_synonym="RP11-373N18.1"
/db_xref="GeneID:119392"
/db_xref="HGNC:HGNC:29574"
CDS 85..783
/gene="C10orf78"
/gene_synonym="bA373N18.1"
/gene_synonym="RP11-373N18.1"
/codon_start=1
/product="chromosome 10 open reading frame 78"
/protein_id="AAI40836.1"
/db_xref="GeneID:119392"
/db_xref="HGNC:HGNC:29574"
/translation="MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRK
TRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNL
KNTLKNLNVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRL
KLVKMYRSKNDLSQLQLLIKKWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDK
LLHYNRSEEEFIDV"
BASE COUNT 307 a 180 c 187 g 268 t
ORIGIN
1 atcttttccg cctaccgcac ggccccgccc ctgccacagg atcgatttac ggccgcagag
61 aaaaaccaag atttcacttt caagatggaa agtccgtcag actcagctgt ggttttacct
121 agcactcctc aggcctctgc gaatccatca tctccctata caaatagttc ccgaaaacaa
181 cctatgagtg caacacttag agaaagatta aggaaaacaa gattttcatt taattcctct
241 tacaatgtgg tgaaacgtct taaagtagag agtgaagaaa atgatcagac cttttcagag
301 aaaccagcat cttccacaga ggaaaactgt ttggaatttc aagaaagttt taaacatata
361 gacagtgaat ttgaagaaaa tacaaatttg aaaaatactt tgaagaatct caatgtctgt
421 gaatctcagt cacttgattc tggatcatgc agtgctctcc aaaatgagtt tgtgagtgag
481 aagcttccta aacaaagatt aaacgctgaa aaagccaaat tggtgaagca ggttcaggag
541 aaagaagacc ttcttcggag gctaaaacta gtcaaaatgt atagatcaaa gaatgatctg
601 tctcagttac agttgttaat aaagaagtgg agaagctgta gccagctctt gctttatgag
661 ttgcagtcag ctgtgtctga agagaacaag aaactaagcc ttactcaatt gatagaccac
721 tatgggttag atgataaatt actacactat aacagaagtg aagaagaatt tatagatgtt
781 taattcctga tttttgctcc agaatatctt tgagaatgac aacttaatta aaagatactt
841 aggcactttt tttttttttt tgagactgag tttcgctctt gtcatcctgg ctggagtgtg
901 atggtgcgat cttgactcac tgcaacctct gcctctcggg tt
//