LOCUS BC140784 6973 bp mRNA linear HUM 30-JUN-2008
DEFINITION Homo sapiens pecanex homolog (Drosophila), mRNA (cDNA clone
MGC:176461 IMAGE:9021652), complete cds.
ACCESSION BC140784
VERSION BC140784.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: l Column: 2.
FEATURES Location/Qualifiers
source 1..6973
/db_xref="H-InvDB:HIT000501536"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176461 IMAGE:9021652"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_313"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TATAATCT"
gene 1..6973
/gene="PCNX"
/db_xref="GeneID:22990"
/db_xref="HGNC:HGNC:19740"
CDS 113..6805
/gene="PCNX"
/codon_start=1
/product="PCNX protein"
/protein_id="AAI40785.1"
/db_xref="GeneID:22990"
/db_xref="HGNC:HGNC:19740"
/translation="MGSQTLQILRQGVWAALSGGWYYDPHQATFVNALHLYLWLFLLG
LPFTLYMALPSTMIIVAVYCPVIAAVFIVLKMVNYRLHRALDAGEVVDRTANEFTDQR
TKAEQGNCSTRRKDSNGPSDPGGGIEMSEFIREATPPVGCSSRNSYAGLDPSNQIGSG
SSRLGTAATIKGDTDTAKTSDDISLSLGQSSSLCKEGSEEQDLAADRKLFRLVSNDSF
ISIQPSLSSCGQDLPRDFSDKVNLPSHNHHHHVDQSLSSACDTEVASLVPLHSHSYRK
DHRPRGVPRTSSSAVAFPDTSLNDFPLYQQRRGLDPVSELESSKPLSGSKESLVENSG
LSGEFQLAGDLKINTSQPPTKSGKSKPLKAEKSMDSLRSLSTRSSGSTESYCSGTDRD
TNSTVSSYKSEQTSSTHIESILSEHEESPKAGTKSGRKKECCAGPEEKNSCASDKRTS
SEKIAMEASTNSGVHEAKDPTPSDEMHNQRGLSTSASEEANKNPHANEFTSQGDRPPG
NTAENKEEKSDKSAVSVDSKVRKDVGGKQKEGDVRPKSSSVIHRTASAHKSGRRRTGK
KRASSFDSSRHRDYVCFRGVSGTKPHSAIFCHDEDSSDQSDLSRASSVQSAHQFSSDS
SSSTTSHSCQSPEGRYSALKTKHTHKERGTDSEHTHKAHLVPEGTSKKRATRRTSSTN
SAKTRARVLSLDSGTVACLNDSNRLMAPESIKPLTTSKSDLEAKEGEVLDELSLLGRA
SQLETVTRSRNSLPNQVAFPEGEEQDAVSGGKFSSTLYETGGCDMSLVNFEPAARRAS
NICDTDSHVSSSTSVRFYPHDVIRLNRLLTIDTDLLEQQDIDLSPDLAATYGPTEEAA
QKVKHYYRFWILPQLWIGINFDRLTLLALFDRNREILENVLAVILAILVAFLGSILLI
QGFFRDIWVFQFCLVIASCQYSLLKSVQPDSSSPRHGHNRIIAYSRPVYFCICCGLIW
LLDYGSRNLTATKFKLYGITFTNPLVFISARDLVIVFTLCFPIVFFIGLLPQVNTFVM
YLCEQLDIHIFGGNATTSLLAALYSFICSIVAVALLYGLCYGALKDSWDGQHIPVLFS
IFCGLLVAVSYHLSRQSSDPSVLFSLVQSKIFPKTEEKNPEDPLSEVKDPLPEKLRNS
VSERLQSDLVVCIVIGVLYFAIHVSTVFTVLQPALKYVLYTLVGFVGFVTHYVLPQVR
KQLPWHCFSHPLLKTLEYNQYEVRNAATMMWFEKLHVWLLFVEKNIIYPLIVLNELSS
SAETIASPKKLNTELGALMITVAGLKLLRSSFSSPTYQYVTVIFTVLFFKFDYEAFSE
TMLLDLFFMSILFNKLWELLYKLQFVYTYIAPWQITWGSAFHAFAQPFAVPHSAMLFI
QAAVSAFFSTPLNPFLGSAIFITSYVRPVKFWERDYNTKRVDHSNTRLASQLDRNPGS
DDNNLNSIFYEHLTRSLQHSLCGDLLLGRWGNYSTGDCFILASDYLNALVHLIEIGNG
LVTFQLRGLEFRGTYCQQREVEAITEGVEEDEGFCCCEPGHIPHMLSFNAAFSQRWLA
WEVIVTKYILEGYSITDNSAASMLQVFDLRKVLTTYYVKGIIYYVTTSSKLEEWLANE
TMQEGLRLCADRNYVDVDPTFNPNIDEDYDHRLAGISRESFCVIYLNWIEYCSSRRAK
PVDVDKDSSLVTLCYGLCVLGRRALGTASHHMSSNLESFLYGLHALFKGDFRISSIRD
EWIFADMELLRKVVVPGIRMSIKLHQDHFTSPDEYDDPTVLYEAIVSHEKNLVIAHEG
DPAWRSAVLANSPSLLALRHVMDDGTNEYKIIMLNRRYLSFRVIKVNKECVRGLWAGQ
QQELVFLRNRNPERGSIQNAKQALRNMINSSCDQPIGYPIFVSPLTTSYSDSHEQLKD
ILGGPISLGNIRNFIVSTWHRLRKGCGAGCNSGGNIEDSDTGGGTSCTGNNATTANNP
HSNVTQGSIGNPGQGSGTGLHPPVTSYPPTLGTSHSSHSVQSGLVRQSPARASVASQS
SYCYSSRHSSLRMSTTGFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLAC
VQHGLPSSSSSSQSIPACKHHTLVGFLATEGGQSSATDAQPGNTLSPANNSHSRKAEV
IYRVQIVDPSQILEGINLSKRKELQWPDEGIRLKAGRNSWKDWSPQEGMEGHVIHRWV
PCSRDPGTRSHIDKAVLLVQIDDKYVTVIETGVLELGAEV"
BASE COUNT 1871 a 1596 c 1646 g 1860 t
ORIGIN
1 ctccggaggt ggatagacgg ggcagctgca ggctccggcg accgaggccg agctggggcc
61 ggggcgggga cggcggcggc ggcggcggcg acggcggcgg cgccgggtgg ggatggggtc
121 gcagacgctg cagatcctcc gacagggggt gtgggccgcg ctcagcgggg gctggtacta
181 cgacccgcac caggccacct tcgtgaacgc gctgcacctc tacctgtggc tctttctgct
241 gggcctgccc ttcaccctct acatggccct tccttctacc atgattatag tagcagttta
301 ttgtcctgtg atagctgctg ttttcattgt tctgaagatg gtcaactatc gactacacag
361 agcacttgat gctggagaag ttgtagatag gactgcaaat gagttcacgg atcagcgaac
421 caaagctgaa caaggcaact gttcaaccag gagaaaagac agcaatggac cgagtgatcc
481 tggtggaggg attgaaatgt ctgagttcat ccgagaggcc acacccccag ttggttgcag
541 ttccagaaat tcttatgccg gtctagatcc aagcaaccag attggatctg gttcctcgcg
601 tcttggaaca gcagcaacta ttaaaggaga tacagacact gctaagactt ctgatgatat
661 cagtttaagt ctgggccaaa gttctagtct ttgtaaggaa ggaagtgaag aacaagattt
721 ggcagctgat cggaagctct ttcgtcttgt ctccaatgac tccttcatct ctattcagcc
781 ttccttatcc tcttgtggac aggacttgcc aagggacttc agtgacaaag tgaacctgcc
841 aagtcataac caccaccacc atgttgatca gtctctgtcc agcgcctgtg acacagaagt
901 agcttctctt gtacctttac actcacactc ttatagaaaa gaccaccggc cgcgaggtgt
961 accacggact tcaagctctg ctgtggcttt tccagacact tcactgaatg attttcccct
1021 ttatcagcaa agacgtggat tggatccagt tagtgagtta gaatcttcca agcctctttc
1081 tggatccaaa gaatccttgg tggaaaattc tggtttatct ggggaatttc agcttgctgg
1141 tgacttgaaa atcaatactt ctcagccacc cacaaaaagt gggaagagca aacctttgaa
1201 agcagagaaa agcatggaca gcttgaggag cctgagcaca cggagtagtg ggtcaacaga
1261 aagctactgc agtggaacgg accgggacac taacagtact gtcagcagct ataaaagtga
1321 gcagaccagc tcaactcaca tagagagcat cctgtcagag catgaggagt ctcctaaagc
1381 aggaacaaaa agtgggagga agaaagagtg ctgtgcaggc ccagaggaga agaatagctg
1441 tgccagtgac aaaaggacta gcagtgaaaa gattgctatg gaagcgagta ccaacagtgg
1501 ggttcacgag gccaaggacc ccaccccctc tgatgagatg cacaaccaga gaggtctcag
1561 cacctctgca tctgaagaag ccaataaaaa tccccatgca aatgaattta cttcccaagg
1621 ggacagacca cctgggaaca ctgcagaaaa caaagaagag aagagtgata agtcagctgt
1681 ttctgtggat tccaaagtgc gtaaagatgt tggtggaaag caaaaggaag gggatgttcg
1741 acctaaatct tctagcgtaa tccatcggac agcttctgcc cacaagtcag gcaggagacg
1801 cacaggaaaa aaacgggcta gcagttttga ttcaagccgg catagagact atgtttgctt
1861 tcgaggtgtt tctggtacca agccacacag tgctatattt tgtcatgacg aagactctag
1921 tgatcagagt gacttgagta gagcatcaag tgttcagtct gctcaccagt tcagcagtga
1981 tagctcttct agcaccactt ctcattcctg tcagtctcct gagggcagat acagtgctct
2041 aaagaccaaa cacactcata aagaaagggg cacagactct gaacacacac acaaagctca
2101 tttggttcct gaaggaacca gcaaaaagcg tgcaacacga cggacttcta gcacaaatag
2161 tgccaagact cgtgcccgag tgttgagcct ggacagtggc acagtagcat gtttgaatga
2221 ctcaaacagg ttaatggcac ctgaaagtat aaagccctta accacttcaa aatcagatct
2281 tgaggccaaa gagggagagg tgctagatga gctatcttta ttaggacggg cttcccagtt
2341 agagacagtc actcgatcta ggaatagctt gccaaaccag gttgcatttc ctgaagggga
2401 agagcaagat gcagtcagtg gaggtaagtt ctcttctacg ctgtatgaga ctggtggctg
2461 tgatatgtca cttgtgaatt ttgaaccagc agcaagaaga gcatccaata tctgtgacac
2521 agattctcat gtatccagtt ctacctcagt tcgattttat ccacatgatg tgattcgatt
2581 gaatagacta ttgaccattg atacagattt gttggagcaa caggacattg atctaagccc
2641 tgacttggca gctacttacg gcccaacaga agaagctgcc caaaaggtta aacactatta
2701 tcgcttttgg atcctacccc agctgtggat tggcattaac tttgacagac tcacactttt
2761 ggccctgttt gatagaaatc gtgagatcct ggaaaatgtg ttagctgtca tcctggctat
2821 tctcgtggcc tttttgggat ctattcttct catacaagga ttcttcagag atatctgggt
2881 cttccagttc tgcctcgtca tagccagctg tcaatactca ctgcttaaga gtgttcaacc
2941 agattcttct tctcccagac atggtcataa tcgtatcatt gcctacagta gaccagttta
3001 tttctgcata tgttgcggtc ttatttggct cttggattat ggtagcagaa acctgactgc
3061 aaccaagttc aaattatatg gaataacttt caccaatcca ctggtgttta tatcagccag
3121 ggatttagtt atagtgttta cactctgttt cccaatagtg tttttcattg gtctcctgcc
3181 tcaggtgaat acatttgtaa tgtacctttg tgaacaattg gatattcata tttttggtgg
3241 taatgccact acaagcctgc ttgcagcact ttacagtttt atctgtagca ttgttgcagt
3301 agccttattg tatggattat gttatggggc tttaaaggat tcttgggatg gccagcatat
3361 tccagtactt ttctccattt tttgtggttt attagtggca gtgtcttacc atctcagccg
3421 acaaagcagt gatccatctg tacttttctc tttagtgcaa tccaagattt ttccaaaaac
3481 ggaagagaaa aatccagaag accctctatc tgaagtaaaa gatccactgc ctgaaaaact
3541 tagaaattct gttagtgagc gattacagtc tgacctggta gtatgcattg taattggtgt
3601 gctgtatttt gctattcatg taagcacagt cttcacagta ttgcagcctg ccctcaagta
3661 tgtgttgtat acattggttg gctttgtggg ttttgtaacc cattatgtgc tgcctcaagt
3721 tagaaaacag ctaccatggc actgtttctc tcatcctctg ctaaagacac tagagtataa
3781 tcagtatgaa gttcgaaatg cagccactat gatgtggttt gagaaacttc atgtgtggct
3841 tctttttgtg gagaagaata taatctatcc attgattgtt ctcaatgaac tgagcagcag
3901 tgcagagaca attgctagtc caaagaaact gaatacagaa ttaggtgctt taatgatcac
3961 tgttgctggt ttgaagttgc tacgatcctc ttttagcagc cctacatatc agtatgttac
4021 agtcatcttt actgtgctgt ttttcaaatt tgactatgaa gctttttcag agaccatgct
4081 gttggatctc ttctttatgt ccatactctt caacaagctt tgggaactac tttataaatt
4141 gcagtttgtg tatacctata ttgccccatg gcagatcaca tggggttctg ctttccatgc
4201 ttttgctcag ccttttgcag tgcctcattc agccatgctg tttattcagg ctgctgtctc
4261 ggccttcttc tctactccac tgaacccctt tctgggaagt gcaatattca tcacttcata
4321 tgtccgacct gtgaaattct gggagagaga ctataacaca aaacgagtgg atcattcaaa
4381 taccagattg gcttcccagc ttgatagaaa tccaggatca gatgacaaca atctgaattc
4441 catcttttat gagcatttaa ctagatccct acagcacagc ctctgtggtg atttgctact
4501 aggacggtgg ggaaactaca gtacagggga ctgtttcatc cttgcctctg actatctcaa
4561 tgcattagta caccttatag agataggcaa tggtctggtc acttttcagc tgcggggact
4621 tgaattcaga ggtacctact gtcaacaacg ggaagtggag gccattactg aaggtgtaga
4681 ggaagatgaa ggattttgct gttgtgaacc tggccatatt cctcacatgc tttcatttaa
4741 tgctgcattt agccagcgat ggctagcttg ggaagtgata gtcacaaagt acattctgga
4801 gggttatagc atcactgata acagtgctgc ttctatgctt caagtctttg atcttcggaa
4861 agtactcacc acttactatg tcaagggtat catttattat gttacgacct cgtctaagct
4921 agaggagtgg ctagctaatg agacaatgca ggaaggactt cgtctgtgtg ctgatcgcaa
4981 ttatgtcgat gtggacccga cctttaatcc aaacattgat gaagactatg accaccgact
5041 ggcaggcata tctagggaga gtttctgtgt gatttacctc aactggatag agtactgctc
5101 ttcccgaaga gcaaagcctg tggatgtgga caaagattca tccctagtga ctctctgtta
5161 tggactctgt gttctgggac ggagagcttt ggggactgca tcccatcata tgtccagtaa
5221 tttagagtca ttcctctatg gattgcatgc cctatttaaa ggagatttcc gtatttcttc
5281 aattcgagat gaatggatct ttgctgacat ggaattgcta agaaaagtag tagtccctgg
5341 gatccgtatg tccattaaac ttcatcagga tcattttact tctccagatg aatatgatga
5401 ccctactgtg ctctatgaag ccatagtatc tcatgagaag aacctcgtaa tagcccatga
5461 aggggaccct gcatggcgga gtgcagtact tgccaactct ccctccttgc ttgctctgcg
5521 gcatgtcatg gatgatggca ccaatgaata taaaatcatc atgctcaaca gacgctacct
5581 gagcttcagg gtcattaaag tgaataagga atgtgtccga ggtctttggg cagggcaaca
5641 gcaggagctt gtttttctac gtaaccgtaa cccagagaga ggtagcatcc aaaatgcaaa
5701 gcaagccctg agaaacatga taaactcatc ttgtgatcaa cctattggct acccaatctt
5761 tgtctcaccc ctgacaactt cttactctga cagccacgaa cagcttaaag acattcttgg
5821 gggtcctatc agcttgggaa atatcaggaa cttcatagtg tcaacctggc acaggcttag
5881 gaaaggttgc ggagctggat gtaacagtgg tggcaatatt gaagattctg atactggagg
5941 tgggacttcc tgcactggta acaatgcaac aactgccaac aatccccaca gcaacgtgac
6001 ccagggaagc attggaaatc ctgggcaggg atcaggaact ggactccacc cacctgtcac
6061 atcttatcct ccaacactag gcactagcca cagctctcac tctgtgcagt cgggcctggt
6121 cagacagtct cctgcccggg cctcagtagc cagccagtct tcctactgct atagcagccg
6181 gcattcatcc ctccggatgt ccaccactgg gtttgtgcct tgtcggcgct cttctactag
6241 tcagatatcg cttcgaaact tgccatcatc catccaatcc cgactgtcga tggtgaacca
6301 aatggaaccc tcaggtcaga gcggcctggc ctgtgtgcag cacggcctgc cttcctccag
6361 cagctccagc caaagcatcc cagcctgcaa acatcacact ctcgtgggct ttcttgcgac
6421 agagggaggt cagagcagtg ccactgatgc acagccaggc aacaccttaa gtcctgccaa
6481 caattcacac tccagaaagg cagaagtgat ttacagagtc caaattgtgg atcccagtca
6541 aattctggaa gggatcaacc tgtctaaaag gaaagagcta cagtggcctg atgaaggaat
6601 ccggttaaaa gctgggagaa atagctggaa agactggagt ccgcaggagg gcatggaagg
6661 ccatgtgatt caccgatggg tgccttgcag cagagatcca ggtaccagat cccacatcga
6721 caaggcagtg cttctggtcc agattgatga taaatatgtg actgtaattg aaactggggt
6781 actagaactt ggggctgaag tgtgagccag tgtttattat aaagacattt ctttttccct
6841 ctcaattcca aggcattgga aaaagagagg aacaagcaga agatgcctgc aggtatcact
6901 ttgatcctat gtgggagcga ctgaaaatag aatgagcttg gttaagcacc tctcctttgc
6961 ccttcaccct gac
//