LOCUS BC140011 1237 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens storkhead box 1, mRNA (cDNA clone IMAGE:8860409),
complete cds.
ACCESSION BC140011
VERSION BC140011.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1237)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1237)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: RIKEN
cDNA Library Preparation: RIKEN
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 13 Row: c Column: 2
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1237
/db_xref="H-InvDB:HIT000391249"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8860409"
/tissue_type="Clones donated by RIKEN"
/clone_lib="NIH_MGC_424"
/lab_host="DH10B"
/note="Vector: pFLC1"
gene 1..1237
/gene="STOX1"
/gene_synonym="PEE4"
/db_xref="GeneID:219736"
/db_xref="HGNC:HGNC:23508"
/db_xref="MIM:609397"
CDS 88..771
/gene="STOX1"
/gene_synonym="PEE4"
/codon_start=1
/product="STOX1 protein"
/protein_id="AAI40012.1"
/db_xref="GeneID:219736"
/db_xref="HGNC:HGNC:23508"
/db_xref="MIM:609397"
/translation="MARPVQLAPGSLALVLCRLEAQKAAGAAEEPGGRAVFRAFRRAN
ARCFWNARLARAASRLAFQGWLRRGVLLVRAPPACLQVLRDAWRRRALRPPRGFRIRA
VGDVFPVQMNPITQSQFVPLGEVLCCAISDMNTAQIVVTQESLLERLMKHHPGIAIPS
EDILYTTLGTLIKERKIYHTGEGYFIVTPQTYFITNTTTQENKRMLPSDESRLMPASM
TYLDTESGI"
BASE COUNT 302 a 298 c 307 g 330 t
ORIGIN
1 ggccgatcct cccgccgagc gagcggcgtc gtagccgccg cgctcgccga ggccctgcgt
61 tgcgggctcc cggccgccgg cgaaagcatg gcccggcccg tgcagctggc gccgggctcg
121 ctggcgctag tgctgtgccg gctggaggcg cagaaggcgg cgggggccgc ggaggagcct
181 ggtgggcgcg cggtgttccg cgctttccgt cgcgccaacg cgcgctgctt ctggaacgcg
241 cggctggcgc gcgccgcctc gcggctggcc ttccagggct ggctgcggcg gggggtgctg
301 ctggtgcgcg cgccccccgc ctgcctgcag gtgctgcgcg atgcctggcg gcgccgggcc
361 ctgcggccgc cgcgcggctt ccgcatcagg gcggtgggtg atgtctttcc agtgcaaatg
421 aatccaataa ctcaatctca gttcgtacct ttgggtgaag ttctttgctg tgctatatct
481 gatatgaata cagctcagat tgtagtaacg caggaatcac ttttggagcg tttgatgaaa
541 catcacccag gcattgcaat tccatcggaa gatattcttt ataccactct gggaacgctg
601 attaaagaaa ggaagattta tcacactgga gaaggatact tcatagttac tcctcagact
661 tacttcatta caaatacaac cacccaggaa aataagagaa tgctgccatc agatgaaagt
721 cgcctgatgc cagcttccat gacatatctg gacacagagt ctgggatcta ataattcagt
781 cattttggat ggactaaaaa gaagacagaa ttttctgcaa aatgtcgaag gcacaaagag
841 cagtcaacca ctcacatcta attccttact accgctaact ccagtcataa acgtttaatt
901 ttcttttgga aacctacttt tttctttata aaaaggtaga gcattattac agaatctttc
961 aatcatgtaa gaattgagta tataagaatt gtctaaaggc aagcatatct atactattaa
1021 ccacattaca cattttgttc taattactgg ctttttttcc tcttttggtg tcttaaggct
1081 ttttgaagct tattttactg tgagtttatt gggagtatat agattatttt cgattaaaaa
1141 gtggaattat tggtcccctt ccaattgtaa ttatcttgaa tttttataca ttagtttctc
1201 aaatatatag aatgccaatt taaaaaaaaa aaaaaaa
//