LOCUS BC139910 1740 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens triadin, mRNA (cDNA clone IMAGE:40147616), complete
cds.
ACCESSION BC139910
VERSION BC139910.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1740)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1740)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: d Column: 8
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1740
/db_xref="H-InvDB:HIT000391231"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147616"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..1740
/gene="TRDN"
/gene_synonym="TDN"
/gene_synonym="TRISK"
/gene_synonym="TRISK51"
/db_xref="GeneID:10345"
/db_xref="HGNC:HGNC:12261"
/db_xref="MIM:603283"
CDS 135..1028
/gene="TRDN"
/gene_synonym="TDN"
/gene_synonym="TRISK"
/gene_synonym="TRISK51"
/codon_start=1
/product="TRDN protein"
/protein_id="AAI39911.1"
/db_xref="GeneID:10345"
/db_xref="HGNC:HGNC:12261"
/db_xref="MIM:603283"
/translation="MTEITAEGNASTTTTVIDSKNGSVPKSPGKVLKRTVTEDIVTTF
SSPAAWLLVIALIITWSAVAIVMFDLVDYKNFSASSIAKIGSDPLKLVRDAMEETTDW
IYGFFSLLSDIISSEDEEDDDGDEDSDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQT
KVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTVAKEQKKAKTAEKSEEKT
KKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKGQSPAIPPPLPT
EQASRPTPASPALEGKYFFFS"
BASE COUNT 712 a 318 c 316 g 394 t
ORIGIN
1 gaaacagcca ggaaaacgaa gagcccccag gttttgacac agaaccctcc accagagttc
61 tcaaatcccc aaatactctg caaagtgcaa cttgacggga acttttcaac tgacttttac
121 ttttgacgac caccatgact gagatcactg ctgaaggaaa tgcatctaca accacaactg
181 tgatagacag caaaaatgga tctgtgccca aatcccccgg aaaagtgctg aagaggacag
241 tcacagaaga catagtgacg acgttcagct cccctgcagc ctggcttctg gtcattgccc
301 tgataatcac gtggtcagct gttgccatcg ttatgtttga tttagtggat tacaaaaact
361 tttcagcaag ctctattgcc aagattggct cagatccttt aaaactggta cgtgatgcta
421 tggaggaaac cacggactgg atctatggct tcttttcttt gttatctgac atcatctcat
481 ctgaagatga agaagatgat gatggtgacg aagatagtga taaaggagaa atagatgagc
541 ctcccttgag aaaaaaagaa atacacaaag ataagactga aaaacaagag aaacctgaaa
601 ggaaaataca aactaaagtt acacacaaag aaaaagaaaa aggaaaagaa aaagtaagag
661 aaaaagaaaa acctgaaaag aaagcaactc acaaggaaaa aattgagaaa aaagaaaaac
721 cagaaacaaa gacagtggcg aaagaacaga agaaagctaa gactgcagaa aagagtgaag
781 aaaagactaa aaaggaagtg aaaggtggaa aacaggagaa agtgaagcaa acagctgcaa
841 aagtaaaaga agtacagaaa acaccatcaa aacccaaaga aaaggaggac aaagagaaag
901 cagctgtgtc aaagcatgaa cagaaaggac aaagcccagc cattccacct cccttaccga
961 cagaacaagc ttccagaccc actccggcat cacctgccct tgaaggcaag tacttttttt
1021 tttcttaaag atctctattg tagataaaat agaatgtaga ggaacagcaa caacaaaaat
1081 agtcacaaag aaacagcaaa atccaatatt ttcttaaata cttttagtat gtctaaacta
1141 tacttttcct aaaattgcaa tttgcttctt ttagaaaacc aaaaatgtcc ccttaagatt
1201 ctatattggt gaccctcagc ttccagaagg atgcccactc tagcactttg ggaatcaagc
1261 aaaaaaatat agggacaaat agataaggct atgccttgca actctgggag ttttaccaca
1321 acttgatcaa tttagtctct gaagaggctg gtgccagatt tgctgggttt gaatctgagc
1381 tccacctttt cctagctttg taaatttgga aagttattta aattaactct tcatgagttt
1441 tgccatctct aagatgatat aagcagagca ctgatctcct agcgttattg tgaggattga
1501 aatatatata tacacacaca ctcacacaca cacaaatact gttttatgta tatgtatagt
1561 ttataagtac tatatacaac tggtggttaa tactactaat aattcttgaa aatatgatgt
1621 ctcaagatca gctttgtaat aaattttgct ggaacgttaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//