LOCUS BC139909 1310 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens slit homolog 1 (Drosophila), mRNA (cDNA clone
IMAGE:40147578), with apparent retained intron.
ACCESSION BC139909
VERSION BC139909.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1310)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1310)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: d Column: 6
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1310
/db_xref="H-InvDB:HIT000391230"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147578"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
BASE COUNT 247 a 426 c 412 g 225 t
ORIGIN
1 gtcagttggg agctggaggg agggagaggg agacgcaggc ggcgaaacgg cagaggagcc
61 gagccccctc cgcccaaggc gccctccctc cgtccgcgca caggcgccgt cgcttggagg
121 agcaaggtgc ctcccagccc gcaggggcgc cgcgcgcaag cccgcgggct cttcggtggc
181 tctgccccgg gactgcacct ggaggcggcc ccggacgggg atggtcagcg gctgctgccg
241 tctggctcgc gagtgggacg ctgtgagggc accatggcgc tgactcccgg gtgggggtcc
301 tcggcggggc cggtccggcc ggagctctgg ctgctgctgt gggcagccgc gtggcgcctg
361 ggtgcctcgg cgtgccccgc cctctgcacc tgcaccggaa ccacggtgga ctgccacggc
421 acggggctgc aggccattcc caagaatata cctcggaaca ccgagcgcct gtgagtatgg
481 tccccgcccc tggctccctg gctccgaggt tgccctccca cccagacgca attccggact
541 tgggggtggg ggcaggacca ttggggcccg tccgggctcc gcagcccaca gacgggtcag
601 tgcctgccgg ggtctttccc gagccaggag ccaggagcgc cgtggtttcc ccatccctgg
661 gattcaaagg gccctcggcg gggttgtcag cttccgtcct cacacctgca ccctgcaccc
721 tgcactccgc accctcaggc cctcctcact gcgccagcgc tttattcctc cagggtgcct
781 gcgaactggt gtcagaaagc cttccttgca cccaggaggg acacttccca cactcgccaa
841 gcacaatgtc tccttttggg cacatggggc tacggccgcg ttctgagcca gctgcgcaga
901 ttcccgctcc cagagcttgc tcctgacgaa gggcagcagg gtgggatgga ggcgaagttt
961 ctggtctgcc ccttcttctc cattgtttgc cccagagcct tgagaattct tcccctgcag
1021 gtgccacgcg ttggtcccct actcacccgc ctccctccac acccagccat ccccaacaca
1081 ggcagacaat gggacctgag ggctttgggt atggggcttg gggtatgtaa cattcagcac
1141 ccgaaaaggg gcaggtgtgt cttggatgga gaacccggtg gataatgcca agaagtcagg
1201 agcttggaga ggggggccca aggttaaaga tattgaccat gacaagtaat aaaaaaatag
1261 catttctctt ccccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//