LOCUS BC139786 1551 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens huntingtin interacting protein 1, mRNA (cDNA clone
IMAGE:40122016), partial cds.
ACCESSION BC139786
VERSION BC139786.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1551)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1551)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 15 Row: e Column: 7.
FEATURES Location/Qualifiers
source 1..1551
/db_xref="H-InvDB:HIT000391197"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40122016"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CTCCTCAT sequenced from the reverse primer"
gene <1..>1551
/gene="HIP1"
/gene_synonym="ILWEQ"
/db_xref="GeneID:3092"
/db_xref="HGNC:HGNC:4913"
/db_xref="MIM:601767"
CDS <1..>1551
/gene="HIP1"
/gene_synonym="ILWEQ"
/codon_start=1
/product="HIP1 protein"
/protein_id="AAI39787.1"
/db_xref="GeneID:3092"
/db_xref="HGNC:HGNC:4913"
/db_xref="MIM:601767"
/translation="CFSPALSEHISPVVVIPAEASSPDSEPVLEKDDLMDMDASQQNL
FDNKFDDIFGSSFSSDPFNFNSQNGVNKDEKDHLIERLYREISGLKAQLENMKTESQR
VVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQREDTEKAQRSLSEIE
RKAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQVSMARQAQVDLEREKKELEDS
LERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQSEANWAAEFAELE
KERDSLVSGAAHREEELSALRKELQDTQLKLASTEESMCQLAKDQRKMLLVGSRKAAE
QVIQDALNQLEEPPLISCAGSADHLLSTVTSISSCIEQLEKSWSQYLACPEDISGLLH
SITLLAHLTSDAIAHGATTCLRAPPEPADSLTEACKQYGRETLAYLASLEEEGSLENA
DSTAMRNCLSKIKAIGEELLPRGLDIKQEELGDLVDKEMAATSAAIETATARIEEMLS
KSRAGDDRG"
BASE COUNT 428 a 402 c 459 g 262 t
ORIGIN
1 tgcttttctc cagctctgtc agaacatatc agccctgtgg tggtgatccc tgcagaggcc
61 tcatcccccg acagcgagcc agtcctagag aaggatgacc tcatggacat ggatgcctct
121 cagcagaatt tatttgacaa caagtttgat gacatctttg gcagttcatt cagcagtgat
181 cccttcaatt tcaacagtca aaatggtgtg aacaaggatg agaaggacca cttaattgag
241 cgactataca gagagatcag tggattgaag gcacagctag aaaacatgaa gactgagagc
301 cagcgggttg tgctgcagct gaagggccac gtcagcgagc tggaagcaga tctggccgag
361 cagcagcacc tgcggcagca ggcggccgac gactgtgaat tcctgcgggc agaactggac
421 gagctcagga ggcagcggga ggacaccgag aaggctcagc ggagcctgtc tgagatagaa
481 aggaaagctc aagccaatga acagcgatat agcaagctaa aggagaagta cagcgagctg
541 gttcagaacc acgctgacct gctgcggaag aatgcagagg tgaccaaaca ggtgtccatg
601 gccagacaag cccaggtaga tttggaacga gagaaaaaag agctggagga ttcgttggag
661 cgcatcagtg accagggcca gcggaagact caagaacagc tggaagttct agagagcttg
721 aagcaggaac ttgccacaag ccaacgggag cttcaggttc tgcaaggcag cctggaaact
781 tctgcccagt cagaagcaaa ctgggcagcc gagttcgccg agctagagaa ggagcgggac
841 agcctggtga gtggcgcagc tcatagggag gaggaattat ctgctcttcg gaaagaactg
901 caggacactc agctcaaact ggccagcaca gaggaatcta tgtgccagct tgccaaagac
961 caacgaaaaa tgcttctggt ggggtccagg aaggctgcgg agcaggtgat acaagacgcc
1021 ctgaaccagc ttgaagaacc tcctctcatc agctgcgctg ggtctgcaga tcacctcctc
1081 tccacggtca catccatttc cagctgcatc gagcaactgg agaaaagctg gagccagtat
1141 ctggcctgcc cagaagacat cagtggactt ctccattcca taaccctgct ggcccacttg
1201 accagcgacg ccattgctca tggtgccacc acctgcctca gagccccacc tgagcctgcc
1261 gactcactga ccgaggcctg taagcagtat ggcagggaaa ccctcgccta cctggcctcc
1321 ctggaggaag agggaagcct tgagaatgcc gacagcacag ccatgaggaa ctgcctgagc
1381 aagatcaagg ccatcggcga ggagctcctg cccaggggac tggacatcaa gcaggaggag
1441 ctgggggacc tggtggacaa ggagatggcg gccacttcag ctgctattga aactgccacg
1501 gccagaatag aggagatgct cagcaaatcc cgagcaggag acgacagggg a
//