LOCUS BC139749 2156 bp mRNA linear HUM 05-APR-2007
DEFINITION Homo sapiens zinc finger protein 254, mRNA (cDNA clone MGC:149513
IMAGE:40115903), complete cds.
ACCESSION BC139749
VERSION BC139749.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2156)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2156)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 15 Row: c Column: 2.
FEATURES Location/Qualifiers
source 1..2156
/db_xref="H-InvDB:HIT000391180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149513 IMAGE:40115903"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..2156
/gene="ZNF254"
/gene_synonym="BMZF-5"
/gene_synonym="HD-ZNF1"
/db_xref="GeneID:9534"
/db_xref="HGNC:HGNC:13047"
/db_xref="MIM:604768"
CDS 80..2059
/gene="ZNF254"
/gene_synonym="BMZF-5"
/gene_synonym="HD-ZNF1"
/codon_start=1
/product="zinc finger protein 254"
/protein_id="AAI39750.1"
/db_xref="GeneID:9534"
/db_xref="HGNC:HGNC:13047"
/db_xref="MIM:604768"
/translation="MPGPPRSLEMGLLTFRDVAIEFSLEEWQHLDIAQQNLYRNVMLE
NYRNLAFLGIAVSKPDLITCLEQGKEPWNMKRHEMVDEPPGMCPHFAQDLWPEQGMED
SFQKAILRRYGKYGHENLQLRKGCKSVDEYKVNKEGYNGLNQCFTTAQSKVFQCDKYL
KVFYKFLNSNRPKIRHTEKKSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKCKECGKT
FNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFN
RSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWS
STLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLST
LTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLT
KHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTH
KIIHTGEKPYKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHKR
IHTGEKPYKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAFFWSSTLTKHKRIH
TGEQPYKWEKFGKAFNRSSHLTTDKITHWREILQV"
BASE COUNT 795 a 418 c 404 g 539 t
ORIGIN
1 actgctctgt gtcctctgct cctagaggcc cagcctctgt ggcgctgtta ccagcaggta
61 ttggagatcc acagctaaga tgccaggacc ccctagaagc ctagaaatgg gactgttgac
121 atttagggat gtggccatag aattctctct ggaggagtgg caacacctgg acattgcaca
181 gcagaattta tatagaaatg tgatgttaga gaactacaga aacctggcct tcctgggtat
241 tgctgtctct aagccagacc tgatcacctg tctggaacaa gggaaagagc cctggaatat
301 gaagcgacat gagatggtgg atgaaccccc aggtatgtgt cctcattttg ctcaagacct
361 ttggccagag cagggcatgg aagattcttt tcaaaaagca atactgagaa gatatggaaa
421 atatggacat gagaatttac agttaagaaa aggctgtaaa agtgtggatg agtataaggt
481 gaacaaagaa ggttataatg gacttaacca gtgtttcaca actgcccaga gcaaagtatt
541 tcaatgtgat aaatatttga aagtcttcta taaattttta aattcaaaca gacctaagat
601 aagacatact gaaaagaaat ctttcaaatg taaaaaacgt gtcaaattat tttgcatgct
661 ttcacataaa acccaacaca aaagcattta tcatagagag aagtcctaca aatgtaaaga
721 atgtggaaaa acctttaatt ggtcctcaac ccttactaat cataggaaaa tttatactga
781 agagaaacct tacaaatgtg aagaatataa caaatctcct aagcaactct caacccttac
841 tacacatgaa ataattcatg ctggagagaa actctacaaa tgtgaagaat gtggtgaagc
901 ttttaatcga tcctcaaatc ttactacaca taagataatt catactggag agaaacctta
961 caagtgtgaa gaatgtggca aagcatttat ctggtcctca acccttactg agcataagaa
1021 aattcatact agaaagaaac cctacaagtg tgaagaatgt ggcaaagcat ttatatggtc
1081 ctcaacacta actagacata agaggatgca cactggagag aaaccctaca aatgtgaaga
1141 atgtggcaaa gcttttagcc agtcctcaac ccttactaca cataagataa ttcatactgg
1201 agagaaacgc tacaaatgct tagaatgtgg caaagctttt aagcaactct caactcttac
1261 tacacataaa ataattcatg ttggagagaa actctacaaa tgtgaagaat gcggcaaagg
1321 ttttaatcga tcttcaaatc ttactacaca taagataatt catactggag agaaacctta
1381 caagtgtgaa gaatgtggca aagcatttat ctggtcctca acccttacta aacataagag
1441 aattcatact agagagaaac cctacaaatg tgaagaatgt ggcaaggcat ttatatggtc
1501 ctcaacccta actagacata agaggatgca cactggagag aaaccctaca aatgtgaaga
1561 atgtggcaaa tcttttagcc aatcctcaac ccttactaca cataagataa ttcatactgg
1621 agagaaaccc tacaaatgtg aagaatgtgg caaagccttt aactggtcct caactcttac
1681 taaacataag ataattcata ctgaagagaa accctacaaa tgtgaaaaat gtggcaaagc
1741 ctttaagcag tcttcaatcc ttactaacca taagagaatt catactggag agaaacccta
1801 taaatgtgaa gaatgtggca aatcttttaa ccggtcttca acttttacta aacataaggt
1861 aattcatact ggagtaaaac cctacaaatg tgaagaatgt ggcaaagcat ttttctggtc
1921 ctcaacccta actaaacata agagaattca tactggagag caaccctaca aatgggaaaa
1981 atttggcaaa gcctttaatc ggtcctcgca cctcaccaca gataagataa ctcattggag
2041 agaaatctta caagtatgaa taatgtgcca aagcctaaga aaaccctcaa ttcttaatag
2101 atataagatt attcctactg gagagaaact acaaacctga gagaggcgct aatgca
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