LOCUS BC139727 1550 bp mRNA linear HUM 29-AUG-2008 DEFINITION Homo sapiens surfactant protein A2B, mRNA (cDNA clone MGC:133169 IMAGE:40024708), complete cds. ACCESSION BC139727 VERSION BC139727.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1550) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1550) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCG Plate: 16 Row: h Column: 9. FEATURES Location/Qualifiers source 1..1550 /db_xref="H-InvDB:HIT000391161_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:133169 IMAGE:40024708" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: CACTCT sequenced from the forward primer" gene 1..1550 /gene="SFTPA2B" /gene_synonym="AC068139.3" /gene_synonym="SFTPA2" /gene_synonym="SP-2A" /gene_synonym="SP-A1" /gene_synonym="SP-A2" /gene_synonym="SPAII" /db_xref="GeneID:6436" /db_xref="HGNC:HGNC:23441" CDS 24..770 /gene="SFTPA2B" /gene_synonym="AC068139.3" /gene_synonym="SFTPA2" /gene_synonym="SP-2A" /gene_synonym="SP-A1" /gene_synonym="SP-A2" /gene_synonym="SPAII" /codon_start=1 /product="surfactant protein A2B" /protein_id="AAI39728.1" /db_xref="GeneID:6436" /db_xref="HGNC:HGNC:23441" /translation="MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGR DGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAH LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG RGKEQCVEMYTDGQWNDRNCLYSRLTICEF" BASE COUNT 342 a 458 c 436 g 314 t ORIGIN 1 gagcagcgac tggacccaga gccatgtggc tgtgccctct ggccctcacc ctcatcttga 61 tggcagcctc tggtgctgcg tgcgaagtga aggacgtttg tgttggaagc cctggtatcc 121 ccggcactcc tggatcccac ggcctgccag gcagggacgg gagagatggt gtcaaaggag 181 accctggccc tccaggcccc atgggtccgc ctggagaaac accatgtcct cctgggaata 241 atgggctgcc tggagcccct ggtgtccctg gagagcgtgg agagaagggg gaggctggcg 301 agagaggccc tccagggctt ccagctcatc tagatgagga gctccaagcc acactccacg 361 acttcagaca tcaaatcctg cagacaaggg gagccctcag tctgcagggc tccataatga 421 cagtaggaga gaaggtcttc tccagcaatg ggcagtccat cacttttgat gccattcagg 481 aggcatgtgc cagagcaggc ggccgcattg ctgtcccaag gaatccagag gaaaatgagg 541 ccattgcaag cttcgtgaag aagtacaaca catatgccta tgtaggcctg actgagggtc 601 ccagccctgg agacttccgc tactcagatg ggacccctgt aaactacacc aactggtacc 661 gaggggagcc tgcaggtcgg ggaaaagagc agtgtgtgga gatgtacaca gatgggcagt 721 ggaatgacag gaactgcctg tactcccgac tgaccatctg tgagttctga gaggcattta 781 ggccatggga cagggaggat cctgtctggc cttcagtttc catccccagg atccacttgg 841 tctgtgagat gctagaactc cctttcaaca gaattcactt gtggctatta gagctggagg 901 cacccttagc cacttcattc ccctgatggg ccctgactct tccccataat cactgaccag 961 ccttgacact ccccttgcaa accatcccag cactgcaccc caggcagcca ctcctagcct 1021 tggcctttgg catgagatgg aggcctcctt attccccatc tggtccagtt ccttcactta 1081 cagatggcag cagtgaggcc ttggggtaga aggatcctcc aaagtcacac agagtgcctg 1141 cctcctggtc ccctcagctc tgcctctgca gcccactgcc tgcccagtgc catcaggatg 1201 agcagtaccg gccaagcata atgacagaga gaggcagatt tcagggaagc cctgactgtg 1261 tggagctaag gacacagtgg agattctctg gcactctgag gtctctgtgg caggcctggt 1321 caggctctcc aggtggtcag agggcccagt ggtgccccag cacggtggtg cccaagccaa 1381 ccctgtgact gacatgtacg attcactcct ttgagtcttt ggatgccaac tcagccccct 1441 gacctggagg cagccggcca aggcctctag ggaagagccc cccactgcag acatgacccg 1501 agtaactttc tgctgatgaa caaatctgca ccccacttca gacctcggtg //